DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp19a

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001121737.1 Gene:dusp19a / 792815 ZFINID:ZDB-GENE-081104-382 Length:213 Species:Danio rerio


Alignment Length:159 Identity:52/159 - (32%)
Similarity:74/159 - (46%) Gaps:21/159 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 DMDLGEYKSFIDAEMLVILGQMDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFF 425
            |:.:|..|.::      :||..||               |.:...|:|..|.|||||...::|.|
Zfish    62 DLQVGYVKPYL------LLGSQDA---------------AHDFATLRKYKVTHILNVAYGVENAF 105

  Fly   426 PGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQW 490
            |..|.|..:.:.|...|:::.:..:..::|.:||.|...|||||..|||||.||||.|.|.....
Zfish   106 PDLFIYKTLSILDQPDTDIISHIKECAQFIDQAKNEKGVVLVHCNSGVSRSVSVVIGYLMLKENQ 170

  Fly   491 EFQQALEHVKKRRSCIKPNKNFLNQLETY 519
            .|......||..|....||..|:.||:.:
Zfish   171 GFGDTFALVKSARPASCPNPGFMEQLKNF 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592 3/17 (18%)
DSP_slingshot 385..523 CDD:350363 45/135 (33%)
dusp19aNP_001121737.1 DSP_DUSP19 64..200 CDD:350373 51/157 (32%)
Blue background indicates that the domain is not in the aligned region.

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