DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and Styxl1

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_017176632.1 Gene:Styxl1 / 76571 MGIID:1923821 Length:347 Species:Mus musculus


Alignment Length:268 Identity:58/268 - (21%)
Similarity:103/268 - (38%) Gaps:53/268 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 SVKVYEKTHIFKPVSVQAMWSALQTLHKVSKKARENNFYASGPSHDWLSSYERRIESDQSCLNEW 300
            |.:.|:::|:.             |..:|.|:           .|.:|......:|..:.|:...
Mouse    54 SKRQYDESHVI-------------TALRVKKR-----------DHQYLIPESVDLECVRYCIVYD 94

  Fly   301 NAMDALESRRPPSPDAIRNKPPEKEETESVIK---------MKLKAIMMSVDLDEVTSK---YIR 353
            :...:||.       .||.:..|:||.|.|.:         :...|:.....|...|.:   .:|
Mouse    95 SNTSSLEL-------CIRRQLEEEEEEEEVEREDKEEDTELLPGPAVEFGQILIHFTRQPVYVLR 152

  Fly   354 GRLEEILDMDLGEYKSFIDAEMLVILGQMDA----PTKIFE-HVYLGSEWNASNLEELQKNGVRH 413
            |..|    ...|.|..|...:::.:..::||    |.:|.. .||||....|.|.:..:...::.
Mouse   153 GGYE----CFSGMYHFFRTQKIIWMPQELDAFQPYPVEILPGRVYLGKISQACNAKMHKDLKIKA 213

  Fly   414 ILNVTREIDNFFPGTFE-YFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSA 477
            .:|::.|...:|.|..: ..::::.|...|.|..|:.....:|.......|.|||....|:|||.
Mouse   214 HVNISMETTPYFIGNADKLLHIKLEDSPDTLLFDYFRHICHFIELHLRLHSVVLVFSTRGISRSV 278

  Fly   478 SVVIAYAM 485
            :.|:|..|
Mouse   279 AAVVALLM 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 12/76 (16%)
DEK_C 328..379 CDD:285919 11/62 (18%)
DSPc 385..519 CDD:238073 28/103 (27%)
Styxl1XP_017176632.1 PTP_DSP_cys 174..>294 CDD:391942 30/113 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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