DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp6

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001039043.2 Gene:dusp6 / 733815 XenbaseID:XB-GENE-978216 Length:378 Species:Xenopus tropicalis


Alignment Length:378 Identity:93/378 - (24%)
Similarity:150/378 - (39%) Gaps:102/378 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 NERTTIGLVVPILADTTIHLDGDGGFSVKVYEKTHIFKPVSVQAMWSALQTLHKVSKKARENNFY 274
            |||.       :|.|...|         ::||.:||...::|......|:.|.|.:...|  :.:
 Frog    30 NERL-------LLMDCRAH---------ELYESSHIEAAINVAIPGIMLRRLKKGNLPIR--SLF 76

  Fly   275 ASGPSHDWLSSYERRIESD-------QSCLNEWNAMDALESRRPPSPDAIRNKPPEKEETESVIK 332
            |.|...:   .:.||..:|       .||  :||                     |....|||:.
 Frog    77 ACGEDRE---KFARRCGTDTVVLYDESSC--DWN---------------------ENTGGESVLG 115

  Fly   333 MKLKAIMMSVDLDE-VTSKYIRG-----------RLEEILDMDLG-------------------- 365
            :.:|.:.     || ..:.|:.|           ..|..||...|                    
 Frog   116 LLMKRLK-----DEGCRAYYLEGGFNKFQAEYPIHCETNLDSSCGSSSPPVLGLGGLRISSDSSS 175

  Fly   366 EYKSFIDAE---------MLVILGQMDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREI 421
            :.:|.||.:         ..:...|...|.:|..::|||...:::||:.|::.|:::|||||..:
 Frog   176 DIESDIDRDPNSATDSDGSPLSNTQPSFPVEILPYLYLGCAKDSTNLDVLEEFGIKYILNVTPNL 240

  Fly   422 DNFF--PGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYA 484
            .|.|  .|.|.|..:.:.|....||.:::.:...:|..|:.:...|||||..|:|||.:|.:||.
 Frog   241 PNLFENAGEFRYKQIPISDHWSQNLSQFFPEAISFIDEARGKSCGVLVHCLAGISRSVTVTVAYL 305

  Fly   485 MKAYQWEFQQALEHVKKRRSCIKPNKNFLNQL---ETYSGMLDAMKNKEKLQR 534
            |:........|.:.||.::|.|.||.||:.||   |...|:.....|:...|:
 Frog   306 MQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTLGLNSPCDNRVPAQQ 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 24/109 (22%)
DEK_C 328..379 CDD:285919 15/91 (16%)
DSPc 385..519 CDD:238073 49/138 (36%)
dusp6NP_001039043.2 DSP_MapKP 17..146 CDD:238723 33/164 (20%)
DSP_MKP_classII 204..340 CDD:350414 48/135 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2281
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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