DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and Dusp4

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_071535.1 Gene:Dusp4 / 60587 RGDID:620625 Length:395 Species:Rattus norvegicus


Alignment Length:366 Identity:86/366 - (23%)
Similarity:151/366 - (41%) Gaps:94/366 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 ENATAAGDNKNTSG-----MEESCLLGIDCNERTTIGLVVPILADTTIHLDGDGGFSVKVYEKTH 244
            ||...||.:..:.|     ....||| :||.         |.||.:..::.|    ||.|...|.
  Rat    23 ENGGTAGSSGGSHGALGLLSGGKCLL-LDCR---------PFLAHSAGYIRG----SVNVRCNTI 73

  Fly   245 IFK----PVSVQAMWSALQTLHKVSKKAR-ENNFYASGPSHDWLSSYERRIESDQSCLNEWNAMD 304
            :.:    .||::.:..|.:.:     :|| .:..|::...:|                       
  Rat    74 VRRRAKGSVSLEQILPAEEEV-----RARLRSGLYSAVIVYD----------------------- 110

  Fly   305 ALESRRPPSPDAIRNKPPEKEETESVIKMKLKAIMMSVDLDEVTSKYIRGRLEEILDMDLGEYKS 369
                .|.|..:::|.        :|.:.:.::|:..:.:..::.  .::|..|..    ..||..
  Rat   111 ----ERSPRAESLRE--------DSTVSLVVQALRRNAERTDIC--LLKGGYERF----SSEYPE 157

  Fly   370 FIDA----------------EMLVI--------LGQMDAPTKIFEHVYLGSEWNASNLEELQKNG 410
            |...                |.|.:        |.....|.:|...:||||.::|:..:.|...|
  Rat   158 FC
SKTKALAAIPPPVPPSTNESLDLGCSSCGTPLHDQGGPVEILPFLYLGSAYHAARRDMLDALG 222

  Fly   411 VRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSR 475
            :..:|||:.:..|.|.|.::|..:.|.|:.|.::..::.:...||...|....:|||||:.|:||
  Rat   223 ITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISR 287

  Fly   476 SASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQL 516
            ||::.:||.|...:...::|.|.||:|||.|.||.:|:.||
  Rat   288 SATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 26/137 (19%)
DEK_C 328..379 CDD:285919 9/74 (12%)
DSPc 385..519 CDD:238073 48/132 (36%)
Dusp4NP_071535.1 DSP_MapKP 9..159 CDD:238723 34/195 (17%)
DSPc 196..332 CDD:238073 48/133 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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