DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp13a

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001103865.1 Gene:dusp13a / 568887 ZFINID:ZDB-GENE-080204-69 Length:189 Species:Danio rerio


Alignment Length:184 Identity:53/184 - (28%)
Similarity:89/184 - (48%) Gaps:21/184 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 LGEYKSFIDAEMLVILGQMDAPT----KIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNF 424
            :.|.::|:.|:.        .||    .::.:||:|:|..|.:...|...|:.||:|......:.
Zfish    15 VAELQNFLLADR--------RPTGHVNHVWPNVYIGNEVAARDKPMLYNMGITHIVNAASGPPHV 71

  Fly   425 FPG-------TFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIA 482
            ..|       ..:|:.|...|.....:..::..|.|:|..|.::..:|.|||.|||||||::|:|
Zfish    72 NTGPRFYRDMNIDYYGVEADDSFDFAISGFFYATARFIRAALSKNGRVFVHCLMGVSRSATLVLA 136

  Fly   483 YAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGMLDAMKNKEKLQRSK 536
            :.|........:|::.|::.|. |.||..|||||. :..|....:.|:||:..|
Zfish   137 FLMICEDLTLMEAIKAVRQHRD-ICPNPGFLNQLR-HLDMRLVRERKKKLEAYK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 328..379 CDD:285919 3/14 (21%)
DSPc 385..519 CDD:238073 45/144 (31%)
dusp13aNP_001103865.1 DSPc 31..173 CDD:238073 43/143 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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