DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and ptpmt1

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001073656.1 Gene:ptpmt1 / 567019 ZFINID:ZDB-GENE-070112-272 Length:183 Species:Danio rerio


Alignment Length:138 Identity:36/138 - (26%)
Similarity:66/138 - (47%) Gaps:10/138 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 VYLGSEWNASNLEEL-QKNGVRHILNVTREID-NFFPGTFEYF------NVRVYDDEKTNL--LK 446
            |.||:....|..||| |...||.::.:..|.: .:|..:.|.:      .:|:...:.|.:  |:
Zfish    36 VILGALPFRSMTEELVQNEKVRGVITMNEEYETKYFCNSAEEWQSVGVEQIRLDTVDLTGVPSLE 100

  Fly   447 YWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKN 511
            :......:..|.:.:||.|.:|||.|.||||::..||.::.:.|..::|.:.:...|..:....:
Zfish   101 HIHKGVDFALRHREQGSSVYIHCKAGRSRSATIAAAYLIRLHCWSPEEACKMLASVRPHVLIRSS 165

  Fly   512 FLNQLETY 519
            .|..|:.|
Zfish   166 QLEMLQKY 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 36/138 (26%)
ptpmt1NP_001073656.1 PTPMT1 28..176 CDD:350374 36/138 (26%)
Blue background indicates that the domain is not in the aligned region.

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