DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and puc

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_061502752.1 Gene:puc / 5667413 VectorBaseID:AGAMI1_009613 Length:422 Species:Anopheles gambiae


Alignment Length:377 Identity:92/377 - (24%)
Similarity:141/377 - (37%) Gaps:111/377 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 IFEHVYLGSEWNASNLEELQKNGVRHILNVT--REIDNFFPGTFEYFNVRVYDDEKTNLLKYWDD 450
            :|.|:.||   |..:..:....|...:||||  :......|| .:|..:...|....|:.:|:.:
Mosquito    67 VFPHLLLG---NGRDAIDPSTVGANCVLNVTCQQPSGQLKPG-LKYKQIPASDTPHQNIKQYFQE 127

  Fly   451 TFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQ 515
            .|.:|..|:.:||.||:||:.|:||||::.|||.|:.......:|.:.||..|..|.||.||:.|
Mosquito   128 AFDFIEEARKKGSTVLLHCQAGISRSATIAIAYVMRYKGLSLIEAYQLVKLARPIISPNLNFMGQ 192

  Fly   516 LETYSGMLDAMKNKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQA------------------- 561
            |                  .:.|.||  ..|.:|.| ..|:|.:.|                   
Mosquito   193 L------------------LELEQNL--IADGKLEP-PPPSPTMAAPPTSQPPFFLIDNCGKFNP 236

  Fly   562 LNQ-------------AKSKSTGEAGVT---PD----GEEEDGSRMHRR-------SIAQKSQRR 599
            ||:             |.:.:|.:.|:|   ||    |:.:|..:.:..       |:|..|...
Mosquito   237 LNEEEMVATRRQLRCAAAAAATTQDGITAEEPDTPMEGDADDDCKNNNNNNRDSGCSVASSSSSA 301

  Fly   600 MVRRSSSTS----------------------PKTQTAVVTKQQSQSMENL--TPERSVAEEPKNM 640
            ....|||.|                      |.|.|:..:.....|..:|  ||..::|..| .|
Mosquito   302 SSSSSSSLSTASYRCGFNGGRFVPPRLTLKLPTTPTSPPSSPSPLSASSLSSTPSPTLAISP-TM 365

  Fly   641 RFPGSNG----ENYSVTQNQVLHIQKHTPLSV---------RTRIHDLEAHR 679
            ..|.:.|    .::||...........||::.         .|..|.|:.||
Mosquito   366 GVPLTMGARKLASFSVPHRPSSLATGMTPMATVPGCATPNPSTTCHSLDDHR 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 45/136 (33%)
pucXP_061502752.1 None
Blue background indicates that the domain is not in the aligned region.

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