DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and styx

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001019561.1 Gene:styx / 554088 ZFINID:ZDB-GENE-050522-45 Length:224 Species:Danio rerio


Alignment Length:161 Identity:57/161 - (35%)
Similarity:91/161 - (56%) Gaps:10/161 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 KIFEHVYLG--SEWNASNLEELQKNGVRHILNVTREID-NF----FPGTFEYFNVRVYDDEKTNL 444
            :|...::||  |....|.|..|:|.|:.||:.|.::|: ||    ||..|.|..:.:.|:...|:
Zfish    32 EILPGLFLGPYSAAMKSKLSMLEKQGITHIVCVRQDIEANFIKPNFPHKFRYLVLDIADNPVENI 96

  Fly   445 LKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPN 509
            ::|:..|..:|......|.|||||...|:||||::||||.|:.:..:::.|..||::||.||.||
Zfish    97 IRYFPTTKEFIDGCLETGGKVLVHGNAGISRSAALVIAYLMETFGVKYRDAFSHVQERRFCINPN 161

  Fly   510 KNFLNQLETYSGMLDA---MKNKEKLQRSKS 537
            ..|::||:.|..:..|   :|....:|..:|
Zfish   162 VGFVHQLQEYEAIYLAKLTIKMMSPIQLGRS 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 53/142 (37%)
styxNP_001019561.1 DSP_STYX 26..176 CDD:350372 53/143 (37%)
Blue background indicates that the domain is not in the aligned region.

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