DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp12

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001016576.1 Gene:dusp12 / 549330 XenbaseID:XB-GENE-5900067 Length:305 Species:Xenopus tropicalis


Alignment Length:216 Identity:63/216 - (29%)
Similarity:93/216 - (43%) Gaps:24/216 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 VYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYIT 456
            :||||..:|::.:.||:.|:.|:|.|..|......|....| |.|.||...:||........::.
 Frog     8 LYLGSASDAADQQRLQEAGITHVLTVDSEAPTGLDGFITKF-VHVLDDASQDLLSCLPACTDFLK 71

  Fly   457 RAKAE-GSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYS 520
            .|..: |..|||||..||||||:|:.||.|.......:.|...::..:|.|:.|:.||.||..|.
 Frog    72 EALGKCGRSVLVHCHSGVSRSAAVIAAYLMHTSNLSLEDACSRLQVLKSDIRMNEEFLGQLSLYE 136

  Fly   521 GM-LDAMKNKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQALNQAKSKSTGEAGVTPDGEEEDG 584
            .| .|.            :....|.|..||...:|..|.:..|.|....|      .|....:..
 Frog   137 TMGCDV------------DMTCASYKQYRLQKVTEKYPELLKLPQEVFAS------DPCSMAQTA 183

  Fly   585 SRMHRRSIAQKSQRRMVRRSS 605
            ..::|   .:|.:|.:.|.:|
 Frog   184 EVLYR---CRKCRRSLFRETS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 47/132 (36%)
dusp12NP_001016576.1 DSP_DUSP12 1..143 CDD:350370 48/147 (33%)
Blue background indicates that the domain is not in the aligned region.

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