DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp19

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001016317.1 Gene:dusp19 / 549071 XenbaseID:XB-GENE-941384 Length:215 Species:Xenopus tropicalis


Alignment Length:216 Identity:58/216 - (26%)
Similarity:93/216 - (43%) Gaps:42/216 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 EETESVIKMKLK--------------------AIMMSVDLDEVTSKYIRGRLEEI-LDMDLGEYK 368
            ||.:...|.|||                    :::..||..|.......|.:::: .|:.:|..|
 Frog     6 EEIKGFTKNKLKKQCTRVTTLSGKRIIETWKDSVVQVVDDPEQRDGSGCGYVQDLSTDLQVGAVK 70

  Fly   369 SFIDAEMLVILGQMDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFN 433
            .::      :||..|.               |.:|:.|:|..|.|||||...:||.||..|.|..
 Frog    71 PWL------LLGSQDV---------------AQDLDVLKKYKVTHILNVAYGVDNAFPNEFTYKK 114

  Fly   434 VRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEH 498
            :.:.|..:|::..::.:.|.::...|.:...|||||..||||:.::.|.:.|...:..|.:|...
 Frog   115 MSILDLPETDIASFFPECFNFLENVKLQNGVVLVHCNAGVSRAPAIAIGFLMYDEKINFARAFSI 179

  Fly   499 VKKRRSCIKPNKNFLNQLETY 519
            ||..|....||..|:.||..|
 Frog   180 VKNARPAACPNPGFMEQLHKY 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592 12/73 (16%)
DSP_slingshot 385..523 CDD:350363 42/135 (31%)
dusp19NP_001016317.1 DSP_DUSP19 65..201 CDD:350373 47/157 (30%)
Blue background indicates that the domain is not in the aligned region.

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