DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssh and dusp22a

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001002514.1 Gene:dusp22a / 436787 ZFINID:ZDB-GENE-040718-219 Length:208 Species:Danio rerio


Alignment Length:218 Identity:61/218 - (27%)
Similarity:101/218 - (46%) Gaps:30/218 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 KIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFP--GTFEYFNVRVYDDEKTNLLKYWD 449
            |:.:.:|||:..:..|.:.|.:||:.|||:|   .:|..|  ....|..:...|....||.:::.
Zfish     7 KVIDGLYLGNIRDPENRDSLSRNGITHILSV---CNNAKPVLEDMTYLCINAADASSQNLSQHFK 68

  Fly   450 DTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLN 514
            ::.|:|...:..|...||||..|||||.:||:||.|....:.:|:.|..||..||.:.||..|..
Zfish    69 ESIRFIHECRLNGGACLVHCLAGVSRSTTVVVAYLMTVTSYGWQECLTAVKAVRSFVGPNYGFQQ 133

  Fly   515 QLETYSGMLDAMKNKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQALNQAKSKSTGEAGVTPDG 579
            ||:.:.     ||     |.|:.:..|:::..:......|....:.:|...:.:         .|
Zfish   134 QLQEFQ-----MK-----QVSEYQAWLRASYRSSPFKDQEQVEALLSLFAEQQQ---------QG 179

  Fly   580 EEED------GSRMHRRSIAQKS 596
            ::.|      |||::..|..|.|
Zfish   180 QQNDPEWMSQGSRIYPLSYNQYS 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 46/137 (34%)
dusp22aNP_001002514.1 PTP_DSP_cys 2..150 CDD:475123 50/155 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.