DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp16

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_998405.2 Gene:dusp16 / 406523 ZFINID:ZDB-GENE-040426-2360 Length:539 Species:Danio rerio


Alignment Length:580 Identity:130/580 - (22%)
Similarity:210/580 - (36%) Gaps:163/580 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 ERRIESD--------QSCLN---EWNAMDAL---ESRRPP---SPDAIRNKPPEKEETESVIKMK 334
            :||::.|        |.|..   |....:.:   :|...|   ||||..          ||:.:|
Zfish    56 KRRLQQDKIQISELLQHCAKRKLELQGQEVVVYDQSSGDPASLSPDAFL----------SVLLVK 110

  Fly   335 LKAIMMSVDLDEVTSKYIRGRLEEILDMDLGEYKSFIDAEMLVILGQMDAPTKIFEHVYLGSEWN 399
            |:....||.|.........|....:.:.......|.:.|..:.:  ....||:|..|:|||.:.:
Zfish   111 LEKSFPSVHLLSGGFLQFSGLFPGLCEGKSALVPSCVSAVCVSV--SSAGPTRILPHLYLGCQRD 173

  Fly   400 ASNLEELQKNGVRHILNVTREI--DNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEG 462
            ..|.|.:|:|.:..:||.:...  .:|.|.| .:..|.|.|.....:|.:.|.:..:|.:|||..
Zfish   174 VLNQELMQQNDIAFVLNASNSCPKPDFIPDT-HFLRVPVNDSFCEKILPWLDRSVEFIEKAKASN 237

  Fly   463 SKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGMLDAMK 527
            ::|||||..|:||||::.|||.||.......:|...||::|..|.||.|||.||..:        
Zfish   238 ARVLVHCLAGISRSATIAIAYIMKRMDMTLDEAYRFVKEKRPTISPNFNFLGQLLDF-------- 294

  Fly   528 NKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQALNQAKSKSTGEAGVTPDGEEEDGSRMHRRSI 592
                      |.||||..|.:  ..:||.|.:..|.:..:.....:||                 
Zfish   295 ----------EKNLKSVCDPQ--RAAEPKPGVSDLLEPLTLPCVLSGV----------------- 330

  Fly   593 AQKSQRRMVRRSSSTSPKTQTAVVTKQQSQSM-ENLTPERSVAEEPKNMRFPGSNGENYSVTQNQ 656
               |:.|::.|          |:......:.: ||..|:||.:.:.::...|.::...:.::.::
Zfish   331 ---SEERLLAR----------ALCGLTLGEDLKENTRPKRSFSLDIQSYGEPAASVRAFPISADK 382

  Fly   657 -------VLHIQKHTPLSVRTRIHDLEAHRADQLPQQPVWTSLTKLITQTSHLGKSVSGSSSGNI 714
                   |..:.:.:|          :..||:....:|..|...:               .||::
Zfish   383 PGCQFSPVQEVSEQSP----------DQERAEDSSARPWGTPALQ---------------RSGSV 422

  Fly   715 DSRRDSSCSDVFSSQVDSVFAKDEGEKRQRRKTHSWTES--LGP-SGGIVLDPT--PQQQKQQSN 774
            |.                       ..|.......|...  ||| |||.:|.|.  |........
Zfish   423 DE-----------------------SPRPVGALKGWHSDMLLGPVSGGWLLPPDLYPGPGGSPYG 464

  Fly   775 AILRPRGTRQRELPSRHASWGSGDNRCCLPQRTSSGSYYDSNRNTTAIFEGVIQDLKRSS 834
            ..:.....|:|   .|..|..:||:|....:.:|              ||   :.|||.|
Zfish   465 CAVGLEAVRRR---GRQRSGDTGDSRRSWHEESS--------------FE---KQLKRRS 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 8/42 (19%)
DEK_C 328..379 CDD:285919 10/50 (20%)
DSPc 385..519 CDD:238073 52/135 (39%)
dusp16NP_998405.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2281
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.950

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