DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp16

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_998405.2 Gene:dusp16 / 406523 ZFINID:ZDB-GENE-040426-2360 Length:539 Species:Danio rerio


Alignment Length:580 Identity:130/580 - (22%)
Similarity:210/580 - (36%) Gaps:163/580 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 ERRIESD--------QSCLN---EWNAMDAL---ESRRPP---SPDAIRNKPPEKEETESVIKMK 334
            :||::.|        |.|..   |....:.:   :|...|   ||||..          ||:.:|
Zfish    56 KRRLQQDKIQISELLQHCAKRKLELQGQEVVVYDQSSGDPASLSPDAFL----------SVLLVK 110

  Fly   335 LKAIMMSVDLDEVTSKYIRGRLEEILDMDLGEYKSFIDAEMLVILGQMDAPTKIFEHVYLGSEWN 399
            |:....||.|.........|....:.:.......|.:.|..:.:  ....||:|..|:|||.:.:
Zfish   111 LEKSFPSVHLLSGGFLQFSGLFPGLC
EGKSALVPSCVSAVCVSV--SSAGPTRILPHLYLGCQRD 173

  Fly   400 ASNLEELQKNGVRHILNVTREI--DNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEG 462
            ..|.|.:|:|.:..:||.:...  .:|.|.| .:..|.|.|.....:|.:.|.:..:|.:|||..
Zfish   174 VLNQELMQQNDIAFVLNASNSCPKPDFIPDT-HFLRVPVNDSFCEKILPWLDRSVEFIEKAKASN 237

  Fly   463 SKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGMLDAMK 527
            ::|||||..|:||||::.|||.||.......:|...||::|..|.||.|||.||..:        
Zfish   238 ARVLVHCLAGISRSATIAIAYIMKRMDMTLDEAYRFVKEKRPTISPNFNFLGQLLDF-------- 294

  Fly   528 NKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQALNQAKSKSTGEAGVTPDGEEEDGSRMHRRSI 592
                      |.||||..|.:  ..:||.|.:..|.:..:.....:||                 
Zfish   295 ----------EKNLKSVCDPQ--RAAEPKPGVSDLLEPLTLPCVLSGV----------------- 330

  Fly   593 AQKSQRRMVRRSSSTSPKTQTAVVTKQQSQSM-ENLTPERSVAEEPKNMRFPGSNGENYSVTQNQ 656
               |:.|::.|          |:......:.: ||..|:||.:.:.::...|.::...:.::.::
Zfish   331 ---SEERLLAR----------ALCGLTLGEDLKENTRPKRSFSLDIQSYGEPAASVRAFPISADK 382

  Fly   657 -------VLHIQKHTPLSVRTRIHDLEAHRADQLPQQPVWTSLTKLITQTSHLGKSVSGSSSGNI 714
                   |..:.:.:|          :..||:....:|..|...:               .||::
Zfish   383 PGCQFSPVQEVSEQSP----------DQERAEDSSARPWGTPALQ---------------RSGSV 422

  Fly   715 DSRRDSSCSDVFSSQVDSVFAKDEGEKRQRRKTHSWTES--LGP-SGGIVLDPT--PQQQKQQSN 774
            |.                       ..|.......|...  ||| |||.:|.|.  |........
Zfish   423 DE-----------------------SPRPVGALKGWHSDMLLGPVSGGWLLPPDLYPGPGGSPYG 464

  Fly   775 AILRPRGTRQRELPSRHASWGSGDNRCCLPQRTSSGSYYDSNRNTTAIFEGVIQDLKRSS 834
            ..:.....|:|   .|..|..:||:|....:.:|              ||   :.|||.|
Zfish   465 CAVGLEAVRRR---GRQRSGDTGDSRRSWHEESS--------------FE---KQLKRRS 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 8/42 (19%)
DEK_C 326..379 CDD:462592 10/52 (19%)
DSP_slingshot 385..523 CDD:350363 52/139 (37%)
dusp16NP_998405.2 DSP_MapKP 11..136 CDD:238723 20/89 (22%)
DSP_MKP_classIII 159..298 CDD:350416 53/157 (34%)

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