DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp1

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_998232.1 Gene:dusp1 / 406340 ZFINID:ZDB-GENE-040426-2018 Length:360 Species:Danio rerio


Alignment Length:132 Identity:46/132 - (34%)
Similarity:82/132 - (62%) Gaps:0/132 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 PTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWD 449
            |.:|...:||||.::||..:.|...|:..::||:....|.|...::|.::.|.|:.|.|:..:::
Zfish   176 PVEILPFLYLGSAYHASRKDMLDMLGITALINVSSNCPNHFEDHYQYKSIPVEDNHKANISSWFN 240

  Fly   450 DTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLN 514
            :...:|...:.:|.:|.|||:.|:||||::.:||.|:..:.:.::|.|.||:|||.|.||.:|:.
Zfish   241 EAIEFIDSVRNKGGRVFVHCQAGISRSATICLAYLMRTNRVKLEEAFEFVKQRRSIISPNFSFMG 305

  Fly   515 QL 516
            ||
Zfish   306 QL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 328..379 CDD:285919
DSPc 385..519 CDD:238073 46/132 (35%)
dusp1NP_998232.1 DSP_MapKP 8..137 CDD:238723
DSPc 175..311 CDD:238073 46/132 (35%)
CDC14 <225..326 CDD:225297 31/83 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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