DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp8a

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_957174.1 Gene:dusp8a / 393854 ZFINID:ZDB-GENE-040426-1842 Length:629 Species:Danio rerio


Alignment Length:471 Identity:120/471 - (25%)
Similarity:187/471 - (39%) Gaps:92/471 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 PTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDN-FFPGTFEYFNVRVYDDEKTNLLKYW 448
            ||:|..|:||||:.:..|.:.:.:||:.::||.:..... .|.....:..:.|.|:....||.:.
Zfish   161 PTRILPHLYLGSQKDVLNKDLMAQNGITYVLNASNTCPKPEFISESHFMRIPVNDNYCEKLLPWL 225

  Fly   449 DDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFL 513
            |.|..:|.:||....:|:|||..|:||||::.|||.||........|...||.||..|.||.|||
Zfish   226 DKTNEFIDKAKVSNCRVIVHCLAGISRSATIAIAYIMKTMGLSSDDAYRFVKDRRPSISPNFNFL 290

  Fly   514 NQLETYSGMLDAMK----NKEKLQRSK-------------SETNLKSTKDARLLPGSEPTP--LI 559
            .||..:...|..:|    .:|||::.|             .:..|::.||...|.|..|:|  |.
Zfish   291 GQLLEFEKGLRLLKALSAGQEKLEQLKEFSEPRGESSSDPEKGRLEAEKDGTELDGKLPSPTSLQ 355

  Fly   560 QALN-------------------QAKSKSTGEAGVTP---DGEEEDGSRMHRRSIAQKSQRRMVR 602
            |..|                   ....||..|....|   ....||..::.:   ....:.|.|.
Zfish   356 QGFNGLNLSAERILDTNRLKRSFSLDIKSVYEPNHCPRLAPAHTEDVPKLCK---LDSPEAREVN 417

  Fly   603 RSSSTSPKTQTAVVTKQQSQSMENLTPERSVAEEPKNMRFPGSNG--------ENYSVTQNQVLH 659
            .....||.:.:..:.:..|     :.||.|  ..|::.|....||        .::|:...:.|.
Zfish   418 GICQHSPVSISPGLAESPS-----IFPESS--SRPRSRRKSKHNGSSAGSSPVHSHSLNLGRTLS 475

  Fly   660 IQKHTPLSVRTRIHDLEAHRADQLP---QQPVWT------SLTKLITQTSHL-----GKSVSGS- 709
            .||.:.|:     .:|:......||   ..|:||      ..|..:|.|...     .:|::|: 
Zfish   476 AQKSSSLN-----DNLKPSLLLSLPTVGSGPMWTKHRDTVQATTPVTPTDEAPWFYGSESMNGNG 535

  Fly   710 SSGNIDSRRDSSCSDVFSSQVDSVFAKDE-GEKRQRRKTHSWTESLGPSGGIVLDPTPQQQKQQS 773
            ..|.:.......||.: ....::|..::: ||.|..|  .||.|....|..     ..:|.|::|
Zfish   536 GGGGMVHFPALGCSSL-PGPCEAVHLREKVGEPRDSR--GSWHEDAPTSSA-----ADKQFKRRS 592

  Fly   774 NAILRPRG---TRQRE 786
            ..:....|   ||.||
Zfish   593 CQMEFEDGISETRSRE 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 50/138 (36%)
dusp8aNP_957174.1 DSP_MapKP 11..137 CDD:238723
DSP_DUSP8 150..300 CDD:350493 50/138 (36%)
Blue background indicates that the domain is not in the aligned region.

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