DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp8a

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_957174.1 Gene:dusp8a / 393854 ZFINID:ZDB-GENE-040426-1842 Length:629 Species:Danio rerio


Alignment Length:471 Identity:120/471 - (25%)
Similarity:187/471 - (39%) Gaps:92/471 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 PTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDN-FFPGTFEYFNVRVYDDEKTNLLKYW 448
            ||:|..|:||||:.:..|.:.:.:||:.::||.:..... .|.....:..:.|.|:....||.:.
Zfish   161 PTRILPHLYLGSQKDVLNKDLMAQNGITYVLNASNTCPKPEFISESHFMRIPVNDNYCEKLLPWL 225

  Fly   449 DDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFL 513
            |.|..:|.:||....:|:|||..|:||||::.|||.||........|...||.||..|.||.|||
Zfish   226 DKTNEFIDKAKVSNCRVIVHCLAGISRSATIAIAYIMKTMGLSSDDAYRFVKDRRPSISPNFNFL 290

  Fly   514 NQLETYSGMLDAMK----NKEKLQRSK-------------SETNLKSTKDARLLPGSEPTP--LI 559
            .||..:...|..:|    .:|||::.|             .:..|::.||...|.|..|:|  |.
Zfish   291 GQLLEFEKGLRLLKALSAGQEKLEQLKEFSEPRGESSSDPEKGRLEAEKDGTELDGKLPSPTSLQ 355

  Fly   560 QALN-------------------QAKSKSTGEAGVTP---DGEEEDGSRMHRRSIAQKSQRRMVR 602
            |..|                   ....||..|....|   ....||..::.:   ....:.|.|.
Zfish   356 QGFNGLNLSAERILDTNRLKRSFSLDIKSVYEPNHCPRLAPAHTEDVPKLCK---LDSPEAREVN 417

  Fly   603 RSSSTSPKTQTAVVTKQQSQSMENLTPERSVAEEPKNMRFPGSNG--------ENYSVTQNQVLH 659
            .....||.:.:..:.:..|     :.||.|  ..|::.|....||        .::|:...:.|.
Zfish   418 GICQHSPVSISPGLAESPS-----IFPESS--SRPRSRRKSKHNGSSAGSSPVHSHSLNLGRTLS 475

  Fly   660 IQKHTPLSVRTRIHDLEAHRADQLP---QQPVWT------SLTKLITQTSHL-----GKSVSGS- 709
            .||.:.|:     .:|:......||   ..|:||      ..|..:|.|...     .:|::|: 
Zfish   476 AQKSSSLN-----DNLKPSLLLSLPTVGSGPMWTKHRDTVQATTPVTPTDEAPWFYGSESMNGNG 535

  Fly   710 SSGNIDSRRDSSCSDVFSSQVDSVFAKDE-GEKRQRRKTHSWTESLGPSGGIVLDPTPQQQKQQS 773
            ..|.:.......||.: ....::|..::: ||.|..|  .||.|....|..     ..:|.|::|
Zfish   536 GGGGMVHFPALGCSSL-PGPCEAVHLREKVGEPRDSR--GSWHEDAPTSSA-----ADKQFKRRS 592

  Fly   774 NAILRPRG---TRQRE 786
            ..:....|   ||.||
Zfish   593 CQMEFEDGISETRSRE 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 328..379 CDD:285919
DSPc 385..519 CDD:238073 50/134 (37%)
dusp8aNP_957174.1 DSP_MapKP 11..137 CDD:238723
DSPc 161..298 CDD:214551 50/136 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2281
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.950

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