DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssh and Dusp22

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_017456091.2 Gene:Dusp22 / 361242 RGDID:1307146 Length:211 Species:Rattus norvegicus


Alignment Length:183 Identity:53/183 - (28%)
Similarity:93/183 - (50%) Gaps:9/183 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 MDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLK 446
            ::...||...:|:|:..:|.:.|:|.:|.|.|||:|.........|. :|..:...|....||.:
  Rat     8 LELQRKILPGLYIGNFKDARDAEQLSRNKVTHILSVHDTARPMLEGV-KYLCIPAADSPSQNLTR 71

  Fly   447 YWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKN 511
            ::.::.::|...:.:|...||||..|||||.::||||.|....:.:::||..|:..|||..||..
  Rat    72 HFKESIKFIHECRLQGEGCLVHCLAGVSRSVTLVIAYIMTVTDFGWEEALHTVRAGRSCANPNLG 136

  Fly   512 FLNQLETYSGMLDAMKNKEKLQRSKSETNLKSTKDARLLPGS-------EPTP 557
            |..||:.:. ..:..:.::.|:....|..|:..::|:.:.|.       ||.|
  Rat   137 FQRQLQEFE-KHEVRQYRQWLREEYGENPLRDAEEAKSILGKYKEQGRMEPRP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 45/137 (33%)
Dusp22XP_017456091.2 DUSP22 13..156 CDD:350429 45/144 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.