DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssh and Dusp4

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_795907.1 Gene:Dusp4 / 319520 MGIID:2442191 Length:398 Species:Mus musculus


Alignment Length:369 Identity:86/369 - (23%)
Similarity:150/369 - (40%) Gaps:97/369 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 ENATAAGDNKNTSGMEES--------CLLGIDCNERTTIGLVVPILADTTIHLDGDGGFSVKVYE 241
            ||........|.||...:        ||| :||.         |.||.:..::.|    ||.|..
Mouse    23 ENGGGGSAGGNGSGSHGALGLLSGGKCLL-LDCR---------PFLAHSAGYIRG----SVNVRC 73

  Fly   242 KTHIFK----PVSVQAMWSALQTLHKVSKKAR-ENNFYASGPSHDWLSSYERRIESDQSCLNEWN 301
            .|.:.:    .||::.:..|.:.:     :|| .:..|::...:|                    
Mouse    74 NTIVRRRAKGSVSLEQILPAEEEV-----RARLRSGLYSAVIVYD-------------------- 113

  Fly   302 AMDALESRRPPSPDAIRNKPPEKEETESVIKMKLKAIMMSVDLDEVTSKYIRGRLEEILDMDLGE 366
                   .|.|..:::|.        :|.:.:.::|:..:.:..::.  .::|..|..    ..|
Mouse   114 -------ERSPRAESLRE--------DSTVSLVVQALRRNAERTDIC--LLKGGYERF----SSE 157

  Fly   367 YKSFIDA----------------EMLVI--------LGQMDAPTKIFEHVYLGSEWNASNLEELQ 407
            |..|...                |.|.:        |.....|.:|...:||||.::|:..:.|.
Mouse   158 YPEFC
SKTKALAAIPPPVPPSTNESLDLGCSSCGTPLHDQGGPVEILPFLYLGSAYHAARRDMLD 222

  Fly   408 KNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMG 472
            ..|:..:|||:.:..|.|.|.::|..:.|.|:.|.::..::.:...||...|....:|||||:.|
Mouse   223 ALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAG 287

  Fly   473 VSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQL 516
            :||||::.:||.|...:...::|.|.||:|||.|.||.:|:.||
Mouse   288 ISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 26/140 (19%)
DEK_C 328..379 CDD:285919 9/74 (12%)
DSPc 385..519 CDD:238073 48/132 (36%)
Dusp4NP_795907.1 DSP_MapKP 9..162 CDD:238723 34/198 (17%)
DSPc 199..335 CDD:238073 48/133 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2281
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.