DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and Dusp18

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001013146.2 Gene:Dusp18 / 305477 RGDID:1306929 Length:204 Species:Rattus norvegicus


Alignment Length:190 Identity:53/190 - (27%)
Similarity:87/190 - (45%) Gaps:14/190 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 TKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDD 450
            ::|.:.:::.:...|::...|..|.:..::||:.|:.|.|....:|..|.|.|.....|..::|.
  Rat    21 SQITKSLFISNGAAANDKLLLSSNQITTVINVSVEVANTFYEDIQYVQVPVVDAPIARLSDFFDP 85

  Fly   451 TFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQ 515
            ...:|...:.:..:.|:||..||||||::.:||.||.:......|....|.||..|:||..|..|
  Rat    86 IADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHAWTKSRRPIIRPNSGFWEQ 150

  Fly   516 LETYSGMLDAMKNKEKLQRSKSETNL------KSTKDARLLPGSEPTPLIQALNQAKSKS 569
            |..|...|   ..|..:|...|...|      |.|:  .::|.|.|.   .|.::.|.|:
  Rat   151 LIHYEFQL---FGKNTMQMVNSPMGLIPDIYEKETR--MMIPLSTPD---GAFHKGKEKA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 40/136 (29%)
Dusp18NP_001013146.2 DUSP18_21 19..176 CDD:350421 45/157 (29%)
Sufficient for mitochondrial localization. /evidence=ECO:0000250 95..141 17/45 (38%)
Blue background indicates that the domain is not in the aligned region.

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