DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and Dusp16

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001100094.1 Gene:Dusp16 / 297682 RGDID:1310721 Length:661 Species:Rattus norvegicus


Alignment Length:501 Identity:130/501 - (25%)
Similarity:189/501 - (37%) Gaps:148/501 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 PTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREI--DNFFPGTFEYFNVRVYDDEKTNLLKY 447
            ||:|..::|||.:.:..|.|.:|:||:.::||.:...  .:|.|.: .:..|.|.|.....:|.:
  Rat   159 PTRILPNLYLGCQRDVLNKELMQQNGIGYVLNASNTCPKPDFIPES-HFLRVPVNDSFCEKILPW 222

  Fly   448 WDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNF 512
            .|.:..:|.:|||....||:||..|:||||::.|||.||.......:|...||::|..|.||.||
  Rat   223 LDKSVDFIEKAKASNGCVLIHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNF 287

  Fly   513 LNQLETYSGMLDAM------KNKEKLQR---------SKSETNLK-----------STKDA---R 548
            :.||..|...:.:.      |:|.||..         :.||...|           ||.:|   |
  Rat   288 MGQLMDYEKTISSQTGMSGPKSKLKLLHLDKASEPVPAASEGGRKNALSLSPPCANSTSEAVGQR 352

  Fly   549 LL-PGSEP---------TPLIQALNQAKSKSTGEAGVTPDGEE-EDGSRMHRR---SIAQKSQRR 599
            |: |.|.|         :||:|||          :|:....|: ||.:|:.|.   .|...|...
  Rat   353 LVHPASVPSLQPSLLEDSPLVQAL----------SGLQLSSEKLEDSNRLKRSFSLDIKSVSYSA 407

  Fly   600 MVRRS-------------------SSTSPKTQTAVVTKQQSQSMENLTPERSVAEEPKNMRFPGS 645
            .|..|                   ..||...|.:.|.:...|:.|. :|::..|..|:.     .
  Rat   408 SVAASLHGFSSEDAMEYYKPSATLDGTSKLCQFSPVQEVSEQTPET-SPDKEEAHIPRQ-----P 466

  Fly   646 NGENYSVTQNQVLHIQK---------------HTPLSVRTRIH---------------------D 674
            .....|.:|...||..:               |...||....|                     .
  Rat   467 QATRPSESQTTRLHSVRTSSTGSTQRPFFSPLHRSGSVEDNYHTNFLFGLSTSQQHLTKSAAGLG 531

  Fly   675 LEAHRADQLPQQPVWTSLTK---LITQTSHLGKSVSGSSSGNIDSRRDSSCSDV--FSSQVDSVF 734
            |:...:|.||.|....|||.   ..|:.||. .|.|....||. |....|||.:  .|.|:.|| 
  Rat   532 LKGWHSDILPPQSSAPSLTSGWYFATEPSHF-YSASAIYGGNA-SYSAYSCSQLPTCSDQIYSV- 593

  Fly   735 AKDEGEKRQRRK-------THSWTESLGPSGGIVLDPTPQQQKQQS 773
                   |:|:|       ..||.|.         .|..:|.|::|
  Rat   594 -------RRRQKPSDRADSRRSWHEE---------SPFEKQFKRRS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 50/139 (36%)
Dusp16NP_001100094.1 DSP_MapKP 10..136 CDD:238723
PTP_DSP_cys 158..301 CDD:475123 50/142 (35%)
Blue background indicates that the domain is not in the aligned region.

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