DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and Y54F10BM.13

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_497538.1 Gene:Y54F10BM.13 / 190277 WormBaseID:WBGene00021867 Length:227 Species:Caenorhabditis elegans


Alignment Length:218 Identity:68/218 - (31%)
Similarity:108/218 - (49%) Gaps:32/218 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 IKMKLKAIMMSVDLD----EVTSKYIRGRLEEILDM--DL---------------GEY---KSFI 371
            ||.:|||..::..|.    .|..:...|..|||.|.  ||               .||   :.||
 Worm    10 IKNRLKATEITTTLPSGEVRVEKRGKNGEYEEIQDSGEDLVDKTTENISNRRRKKVEYLQRRGFI 74

  Fly   372 -DAEMLVILGQMDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVR 435
             |.|..:::|:. .|..:|     ||:..|::|..|:...:.||:||...|.|.||..|||..:.
 Worm    75 VDLEPDLVVGEA-LPDLLF-----GSQDVAADLPILENRKITHIVNVGTGIPNHFPKKFEYLQID 133

  Fly   436 VYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVK 500
            :.|..:|.::.|::..|.:|.:.:.....|.:||..|:||||:.|:||.||..:...::|::..:
 Worm   134 ILDLPETRIIDYFERVFEFIDKVRQNEGIVFIHCNAGISRSATFVVAYLMKNLKISCREAMDKCR 198

  Fly   501 KRRSCIKPNKNFLNQLETYSGML 523
            :.|| |:||..|..||:.|..:|
 Worm   199 ETRS-IRPNTGFAQQLKEYEAIL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 328..379 CDD:285919 20/72 (28%)
DSPc 385..519 CDD:238073 45/133 (34%)
Y54F10BM.13NP_497538.1 DSPc 87..217 CDD:238073 45/135 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 89 1.000 Domainoid score I5018
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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