DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssh and Dusp8

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_032774.1 Gene:Dusp8 / 18218 MGIID:106626 Length:663 Species:Mus musculus


Alignment Length:686 Identity:148/686 - (21%)
Similarity:218/686 - (31%) Gaps:273/686 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 TKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDN-FFPGTFEYFNVRVYDDEKTNLLKYWD 449
            |:|..|:||||:.:..|.:.:.:||:.::||.:..... .|.....:..:.:.|:....||.:.|
Mouse   162 TRILPHLYLGSQKDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMRIPINDNYCEKLLPWLD 226

  Fly   450 DTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLN 514
            .:..:|.:||....:|:|||..|:||||::.|||.||........|...||.||..|.||.|||.
Mouse   227 KSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLG 291

  Fly   515 QLETYSGMLDAMKNKEKLQRSKSETNLKSTKDARLLPGSE-PTPLIQALNQAKSKSTGEAGVTPD 578
            ||..|.      ::.:.|...:::.....|.:..:.|.:. |.|.:       ..||.|:..|  
Mouse   292 QLLEYE------RSLKLLAALQTDGPHLGTPEPLMGPAAGIPLPRL-------PPSTSESAAT-- 341

  Fly   579 GEEEDGSRMHRRSIAQKSQRRMVRRSSSTSPKTQTAVVTKQQSQSMENLTPERSVAEEPKNMRFP 643
            |.|           |..:.|.....:...:|...||..|....|.:..                 
Mouse   342 GSE-----------AATAAREGSPSAGGDAPIPSTAPATSALQQGLRG----------------- 378

  Fly   644 GSNGENYSVTQNQVLHIQKHTPLSVRTRIHDLEAHRADQLPQQPVWTSLTKLITQTSHLGKSVSG 708
                          ||:..       .|:.|                        |:.|.:|   
Mouse   379 --------------LHLSS-------DRLQD------------------------TNRLKRS--- 395

  Fly   709 SSSGNIDSRRDSSCSDVFSSQVDSVFA----------KDEGEKRQRRKTHSWTESLGPSGGIVLD 763
                             ||..:.|.:|          .|.||..:..|..|      ||||.:..
Mouse   396 -----------------FSLDIKSAYAPSRRPDFPGPPDPGEAPKLCKLDS------PSGGTLGL 437

  Fly   764 PTPQQQKQQSNAILRPRGTRQR---ELPSRHASWGSGDNRCCLPQRTSSGSYYDSNRNTTAIFEG 825
            |:|......|....|||..|:|   ..|:|..:.|.|.|            :.|:.|.|..    
Mouse   438 PSPSPDSPDSVPECRPRPRRRRPPASSPARSPAHGLGLN------------FGDTARQTPR---- 486

  Fly   826 VIQDLKRSSNCNVIEGVAVAVEP-IVGVGE-----GTVKRTKQKLEESTSLKKRCQEESQELLLE 884
                          .|::....| :.|.|:     |.|                           
Mouse   487 --------------HGLSALSAPGLPGPGQPAGPGGWV--------------------------- 510

  Fly   885 AVDAGQRRCPSLYRSASSAHSPRQRQPLRCNSEELMHTSDIENKNTTPGDHEATVVLRVQGQTLA 949
                     |.|    .|..:|....|. |.|.|              |......|....|    
Mouse   511 ---------PPL----DSPGTPSPDGPW-CFSPE--------------GAQGPGAVFSAFG---- 543

  Fly   950 DDQRIS------GNVQILKQNFEAKAGVVGTGGGGGGGTAAGSGSSSTIATSVSAVAGACSANPG 1008
               |:|      ||        .:.:|..|.|||||||...|.||||:.::|.|           
Mouse   544 ---RVSAGAPGPGN--------SSSSGGGGGGGGGGGGGGGGGGSSSSNSSSSS----------- 586

  Fly  1009 KKTTSHQSLPSSPVAQHANHVSAASNSNSSASNSSD 1044
                                 |::|:|:||:|:|||
Mouse   587 ---------------------SSSSSSSSSSSSSSD 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 328..379 CDD:285919
DSPc 385..519 CDD:238073 47/133 (35%)
Dusp8NP_032774.1 DSP_MapKP 10..137 CDD:238723
DSP_DUSP8 150..300 CDD:350493 48/143 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..367 14/73 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..624 72/336 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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