DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and F26A3.4

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_492133.1 Gene:F26A3.4 / 172525 WormBaseID:WBGene00009142 Length:226 Species:Caenorhabditis elegans


Alignment Length:218 Identity:57/218 - (26%)
Similarity:95/218 - (43%) Gaps:45/218 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 NASNLEELQKNGVRHILNVTREIDNF---------------FPGTFEYFNVRVYDDEKTNLLKYW 448
            :|.:.:|::|:.:.||:|.|.|:.|.               .|.|:.|.::.:..|:...|:   
 Worm    27 SALSKDEMKKHKITHIINATTEVPNLRSLGDIQRTKLWLEDTPQTYIYPHLELQSDQIQALI--- 88

  Fly   449 DDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFL 513
                       |:|.||||||..|||||||:.:|:.:|......::|...:|.:||.::||..|.
 Worm    89 -----------ADGGKVLVHCVAGVSRSASICLAFLLKYRCRNLREAYHLMKSKRSMVRPNLGFW 142

  Fly   514 NQLETYSGMLDAMKNKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQALNQAKSKSTGEAGVTPD 578
            .||..|...:.......:|.|.:::..       :|||   ...|..|:....:....:..:.||
 Worm   143 RQLIAYEQNVKENAGSVRLVRDEAQPE-------QLLP---DVYLNIAIPARPASPEQDPNMIPD 197

  Fly   579 GEEEDGSRMHRRSIAQKSQRRMV 601
            ...|      ||:...||:.|.|
 Worm   198 EPRE------RRNSGFKSKFRPV 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 41/138 (30%)
F26A3.4NP_492133.1 DUSP14-like 14..146 CDD:350364 39/132 (30%)
Blue background indicates that the domain is not in the aligned region.

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