DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and DUSP19

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_543152.1 Gene:DUSP19 / 142679 HGNCID:18894 Length:217 Species:Homo sapiens


Alignment Length:178 Identity:62/178 - (34%)
Similarity:93/178 - (52%) Gaps:24/178 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 DMDLGEYKSFIDAEMLVILGQMDAPTKIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFF 425
            |:.:|..|.::      :||..||               |.:|:.|:||.|.|||||...::|.|
Human    63 DLQVGVIKPWL------LLGSQDA---------------AHDLDTLKKNKVTHILNVAYGVENAF 106

  Fly   426 PGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQW 490
            ...|.|.::.:.|..:||:|.|:.:.|.:|..||.:...|||||..||||:|::||.:.|.:.|.
Human   107 LSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHCNAGVSRAAAIVIGFLMNSEQT 171

  Fly   491 EFQQALEHVKKRRSCIKPNKNFLNQLETYSGMLDAMKNK-EKLQRSKS 537
            .|..|...||..|..|.||..|:.||.||....::  || :::|.:.|
Human   172 SFTSAFSLVKNARPSICPNSGFMEQLRTYQEGKES--NKCDRIQENSS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 328..379 CDD:285919 3/17 (18%)
DSPc 385..519 CDD:238073 49/133 (37%)
DUSP19NP_543152.1 DSP_DUSP19 65..201 CDD:350373 56/156 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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