DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and LOC1280446

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_320299.5 Gene:LOC1280446 / 1280446 VectorBaseID:AGAMI1_003694 Length:566 Species:Anopheles gambiae


Alignment Length:849 Identity:161/849 - (18%)
Similarity:241/849 - (28%) Gaps:369/849 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 KIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDDT 451
            |:...:|:|:..::.:.::|.:.|:.||:::......|.|.. .|..|...|....||.:|:...
Mosquito     7 KVMPGLYIGNYRDSKDYQQLDRYGITHIVSIHDSPRRFHPDK-HYLCVIAADKPDQNLSQYFSVC 70

  Fly   452 FRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQL 516
            ..:|..|:.:...||:||..|:|||.:|.:||.|......:::||:.|:..||...||..|.|||
Mosquito    71 NDFIHSARLKQGNVLIHCLAGMSRSVTVAVAYIMCVTPLSWKEALKVVRAGRSIANPNLGFQNQL 135

  Fly   517 ETYS--------------------GMLD------AMKNKEKLQRSKS--ETNLKSTKDARLLPGS 553
            :.:.                    .:.|      |:...|:|..||.  |.:.|..||.      
Mosquito   136 QDFETNKLIEERRRLKERFPSLALELTDKEQCYLALDYYEELLESKGVCEGHCKFGKDC------ 194

  Fly   554 EPTPLIQALNQAKSKSTGEAGVTPDGEEEDGSRMHRRSIAQKSQRRMVRRSSSTSPKTQTAVVTK 618
             ||.:      .::.|.|  |:.|.         .:.|::.|.|   ...|.||||.|.      
Mosquito   195 -PTGI------CRTDSRG--GIRPS---------RKPSLSSKKQ---YNTSLSTSPSTS------ 232

  Fly   619 QQSQSMENLTPERSVAEEPKNMRFPGSNGENYSVTQNQVLHIQKHTPLSVRTRIHDLEAHRADQL 683
                                                         :.||||:             
Mosquito   233 ---------------------------------------------SQLSVRS------------- 239

  Fly   684 PQQPVWTSLTKLITQTSHLGKSVSGSSSGNIDSRRDSSCSDVFSSQVDSVFAKDEGEKRQRRKTH 748
                              .|...||...|.........||...|               ||:   
Mosquito   240 ------------------AGNPASGGGGGAQSCPTSPRCSKALS---------------QRQ--- 268

  Fly   749 SWTESLGPSGGIVLDPTPQQQKQQSNAILRPRGTRQRELPSRHASWGSGDNRCCLPQRTSSGSYY 813
                  |..|.....|.            .||                           ::|.| 
Mosquito   269 ------GGGGAATRHPD------------NPR---------------------------AAGEY- 287

  Fly   814 DSNRNTTAIFEGVIQDLKRSSNCNVIEGVAVAVEPIVGVGEGTVKRTKQKLEESTSLKKRCQEES 878
                 ...|..|.|.:|:|||:      :.....|                              
Mosquito   288 -----AAEIDLGEISELRRSSS------IVSTFRP------------------------------ 311

  Fly   879 QELLLEAVDAGQRRCPS-LYRSASSAHSPRQRQPLRCNSEELMHTSDIENKNTTPGDHEATVVLR 942
                        |..|: ||....||                           .|..|.:.|.|.
Mosquito   312 ------------RSSPAGLYSYTGSA---------------------------PPSVHGSRVDLS 337

  Fly   943 VQGQTLADDQRISGNVQILKQNFEAKAGVVGTGGGGGGGTAAGSGSSSTIATSVSAVAGACSANP 1007
            |.|.|                   ..|..:|..|.|..|....||     |||.||   ..|..|
Mosquito   338 VSGGT-------------------GSAIYLGASGSGSSGATGASG-----ATSGSA---GNSPGP 375

  Fly  1008 GK--------KTTSHQSLPSSPVAQHANHVSAASNSNSSASNSSDSSVS---------------- 1048
            |:        |:|...:..|||.|......|:.|.::|:|:.|...|||                
Mosquito   376 GRRLSMRSTPKSTPRSTPESSPKASPKKSASSRSLASSTATASPKKSVSGSGRTATVTPVTTSTP 440

  Fly  1049 ----------ENCDRNVKGLVHKYQTTTSCSSQAAATPTVACAPLPPAGTASNI-SHSCS----- 1097
                      |..|:....|..|.....|.::.:|||.|..        ::||: |.:|:     
Mosquito   441 PSSNSGPPRKEPADKPTGKLTSKTTVPGSGANASAATTTTT--------SSSNVPSRACTATRTP 497

  Fly  1098 ------TTTTTSFKQRPLS-----YYDRSLSNRSTHDYSDSRPPPAPVRVSHSSNVQHQQQQQQQ 1151
                  ||||.:......|     .|.||...|.|.....::|..:....|..:.:.:.....:.
Mosquito   498 SIVIDITTTTATITTGVTSTGKDAAYGRSDEKRDTTSKDKTKPGASTTNTSSKAVIANNNANSRA 562

  Fly  1152 LQPE 1155
            ::.|
Mosquito   563 MKKE 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 40/155 (26%)
LOC1280446XP_320299.5 None
Blue background indicates that the domain is not in the aligned region.

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