DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and PTPMT1

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_783859.1 Gene:PTPMT1 / 114971 HGNCID:26965 Length:201 Species:Homo sapiens


Alignment Length:152 Identity:37/152 - (24%)
Similarity:63/152 - (41%) Gaps:46/152 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 EWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAE 461
            ||....:|:|:.:.|.  :.....:||...|.                        ::..:.::.
Human    86 EWKRLGVEQLRLSTVD--MTGIPTLDNLQKGV------------------------QFALKYQSL 124

  Fly   462 GSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSC--IKPNKNFLNQLETYSGMLD 524
            |..|.||||.|.||||::|.||.::.::|..::|:..:.|.||.  |:|            |.||
Human   125 GQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRP------------GQLD 177

  Fly   525 AMKNKEKLQRSKSETNLKSTKD 546
            .:|...|      :...::|||
Human   178 VLKEFHK------QITARATKD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 30/127 (24%)
PTPMT1NP_783859.1 PTPMT1 37..185 CDD:350374 34/142 (24%)
Blue background indicates that the domain is not in the aligned region.

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