DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ssh and dusp10

DIOPT Version :9

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_031758376.1 Gene:dusp10 / 101731867 -ID:- Length:477 Species:Xenopus tropicalis


Alignment Length:508 Identity:119/508 - (23%)
Similarity:196/508 - (38%) Gaps:106/508 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LVLALKDIPPLTQSERRLSTDSTRSSNSTQSNNSDIQLHLQSMFYLLQREDTLKMAVKLESQRSN 112
            :::||.  .|:......|..||:...:|:..::|...|...|:..|    :...:.....|..|.
 Frog    10 VIVALS--RPVRPQVLNLCLDSSYFESSSILSDSHKSLLSTSVVCL----NAANLTYMPSSTSSA 68

  Fly   113 RTRYLVIASRSCCRSGTSDRRRHRIMRHHSVKVGGSAGTKSSTSPAVPTQRQLSVEQTATEASSK 177
            |:.....:|.|||...:.|                    |.|.|.||.:....|.....:.:||.
 Frog    69 RSLGCGCSSASCCTVASYD--------------------KDSQSQAVSSTTITSGVSGPSASSSA 113

  Fly   178 CDKTADKENATAAGDNKNTSGMEESCLLGIDCNERTTIGLVVP------ILADTTIHLDGDGGFS 236
            .....:.||:.|.    ::||   |.:.|. ..:.:.|.::.|      |...|..||...|...
 Frog   114 NQMVNNNENSGAL----SSSG---SPISGA-TKQFSNIKIIYPNDLAKKISKCTKTHLPNQGPVI 170

  Fly   237 VKV-----YEKTHIFKPVSVQAMWSALQTLHKVSKKARENNFYASGPSHDWLSSYERRIESDQ-- 294
            :..     |.|:||...|.:...       .|:|:                     ||::..:  
 Frog   171 IDCRPFMEYNKSHIQGAVHINCS-------DKISR---------------------RRLQQGKIT 207

  Fly   295 -----SCLNEWNAMDALESRRPPSPDAIRNKPPEKEETESVIKMKLKAIMMSVDLDEVTSKYIRG 354
                 ||....::...:.|:.....|...|:|.....|:     .|..::.|:..:......::|
 Frog   208 VLDLISCREGKDSFKRIFSKEIIVYDDNTNEPSRVMPTQ-----PLHTVLESLKREGKEPLVLKG 267

  Fly   355 RL-------EEILD--MDLGEYKSFIDAEMLVILGQMDAP----------TKIFEHVYLGSEWNA 400
            .|       |.:.|  :.|.:......|..:.|......|          |.|...:|||:|.:|
 Frog   268 GLSSFKQNHESLCDNSLQLQDCSDGGGASAVSITLPQSIPTTPDIENAELTPILPFLYLGNEHDA 332

  Fly   401 SNLEELQKNGVRHILNVTREID--NFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEGS 463
            .:||.:|...:.:|:|||..:.  ::..|.|.|..:...|..|.||.:|:::.|.:|..|...|.
 Frog   333 QDLETMQTRNISYIVNVTTHLPLYHYEKGVFNYKRLPATDSNKQNLRQYFEEAFEFIDEAHQCGK 397

  Fly   464 KVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQL 516
            .:|:||:.||||||::||||.||..:.....|.:.||.:|..|.||.||:.||
 Frog   398 ALLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 53/282 (19%)
DEK_C 328..379 CDD:285919 8/59 (14%)
DSPc 385..519 CDD:238073 53/144 (37%)
dusp10XP_031758376.1 DSP_MapKP 145..280 CDD:238723 27/167 (16%)
DSP_DUSP10 317..468 CDD:350415 52/134 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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