DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and LOC100537679

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_073775143.1 Gene:LOC100537679 / 100537679 -ID:- Length:303 Species:Danio rerio


Alignment Length:196 Identity:58/196 - (29%)
Similarity:95/196 - (48%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 TSKYIRGR-LEEILDMDLGEYKSFIDAEMLVILGQMDAPTKIFEHVYLGSEWNASNLEELQKNGV 411
            :|:|:..| ||.:||            ...:.|.|:|   :::.::|:|:...|.|...||:.|:
Zfish   126 SSQYLSVRDLERMLD------------SCKLNLHQID---EVWPNIYIGNVGIAQNRSALQQLGI 175

  Fly   412 RHILNVTRE------IDNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYITRA-KAEGSKVLVHC 469
            .||||....      ...::..:|.|..:...|:...:|..|:.....:|.|| .:...||||||
Zfish   176 THILNAAHSKRGSIGDQQYYGSSFVYCGIPADDNTHFDLDVYFKPAADFIHRALHSPDGKVLVHC 240

  Fly   470 KMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGMLD---AMKNKEK 531
            .||:|||:::|:||.|..:......|:..:.::|: |.||:|||..|      ||   ..|.|.:
Zfish   241 IMGMSRSSTLVLAYLMLYHDMPLHTAIRRIIRKRA-IYPNRNFLALL------LDLDLQRKRKHR 298

  Fly   532 L 532
            |
Zfish   299 L 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592 7/31 (23%)
DSP_slingshot 385..523 CDD:350363 43/144 (30%)
LOC100537679XP_073775143.1 None
Blue background indicates that the domain is not in the aligned region.

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