Sequence 1: | NP_733063.1 | Gene: | ssh / 42986 | FlyBaseID: | FBgn0029157 | Length: | 1193 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911756.2 | Gene: | ssh2 / 100488169 | XenbaseID: | XB-GENE-993093 | Length: | 1419 | Species: | Xenopus tropicalis |
Alignment Length: | 1519 | Identity: | 412/1519 - (27%) |
---|---|---|---|
Similarity: | 596/1519 - (39%) | Gaps: | 464/1519 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 CSLPDDILIFSLTPRDGESEDDEGNSKGNDRSECFFAGKGTALVLALKDIPPLTQSERRLSTDST 70
Fly 71 RSSNSTQSNNSDIQLHLQSMFYLLQREDTLKMAVKLESQRSNRTRYLVIASRSCCRSGTSDRRRH 135
Fly 136 RIMRHHSVKVGGSAGTKSSTSPAVPTQRQLSVEQTATEASSKCDKTADKENATAAGDNKNTSGME 200
Fly 201 ESCLLGID--CNERT--TIGLVVPILADTTIHLDGDGGFSVKVYEKTHIFKPVSVQAMWSALQTL 261
Fly 262 HKVSKKARENNFYASGPSHDWLSSYERRIESDQSCLNEWNAMDALESRRPPSPDAIRNKPPEKEE 326
Fly 327 TESVIKMKLKAIMMSVDLDEVTSKYIRGRLEEILDMDLGEYKSFIDAEMLVILGQMDAPTKIFEH 391
Fly 392 VYLGSEWNASNLEELQKNGVRHILNVTREIDNFFPGTFEYFNVRVYDDEKTNLLKYWDDTFRYIT 456
Fly 457 RAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSG 521
Fly 522 MLDAMKNK-EKLQRSKSETNLKSTKDARLLPGSEPTPLIQALNQAKSKSTGEAGVTPDGEEEDGS 585
Fly 586 RMHRR----------SIAQKSQRRM-------------------------VRRSSSTSPKTQTAV 615
Fly 616 VTKQQSQSMENLT-----PERSVAEEPKNMRFPGSNGENYSVTQNQVLHIQ---------KHTP- 665
Fly 666 -LSVRTRIHDLEAHRADQLPQQPVWTSLTKLI-TQTSHLGKSVSGSSSGNIDSRRDSSC------ 722
Fly 723 SDVFSSQVDSVFAKDEGEKRQRRKTHSWTESLGP---SGGIVLDPTPQQQKQQSNAILRPRGTRQ 784
Fly 785 RELPSRHASWGSGDNRCCLPQRTSSGSYYDSNRNT-----------------------TAIFEGV 826
Fly 827 IQDLKRSSNCNVIEGVAVAVEPIVGVGE----------------GTVKRTKQKLEE--------- 866
Fly 867 -STSLKKRCQEESQELLLEAVDAGQRRCPSLYRSASSAHSPRQRQPLRC------NSEE------ 918
Fly 919 ---------LMH-----TSDIENKNTT------------------------------------PG 933
Fly 934 DHE-------ATVVLRVQGQTL----------------------------ADDQRISGNVQI--- 960
Fly 961 -----LKQNFEAKAGVVGTGGGGGGGTAAGSGSSSTI------ATSVSAVAGACSANPGKKTTSH 1014
Fly 1015 QSLPSSPVAQHANHVSAASNSNSSASNSSDSSVSENCDRNVK----------------------- 1056
Fly 1057 GLVHKYQTTTSCSSQAAATPTVAC-------APLPPAG--TASNISHSCSTTTTTSFKQRPLSYY 1112
Fly 1113 DRSLSNRSTHDYSD--------------------SRPPPAPVRV----SHSSNVQHQQQQ----- 1148
Fly 1149 ----------------------QQQLQPEQHQQ--------------------QVQIRRLAQHGK 1171
Fly 1172 THPLSRL--SAPKTGFNTAAYNTM 1193 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssh | NP_733063.1 | SSH-N | 21..313 | CDD:212166 | 105/295 (36%) |
DEK_C | 328..379 | CDD:285919 | 26/50 (52%) | ||
DSPc | 385..519 | CDD:238073 | 93/133 (70%) | ||
ssh2 | XP_004911756.2 | SSH-N | 43..262 | CDD:212166 | 107/301 (36%) |
DEK_C | 276..328 | CDD:400903 | 27/51 (53%) | ||
DSP_slingshot_2 | 331..474 | CDD:350417 | 98/142 (69%) | ||
MDN1 | <634..974 | CDD:227596 | 63/358 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 200 | 1.000 | Domainoid score | I2986 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1464 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1576308at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm49159 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45864 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2281 |
SonicParanoid | 1 | 1.000 | - | - | X2719 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.100 |