DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and si:dkey-175m17.7

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_001345798.2 Gene:si:dkey-175m17.7 / 100007304 ZFINID:ZDB-GENE-091204-18 Length:900 Species:Danio rerio


Alignment Length:633 Identity:140/633 - (22%)
Similarity:220/633 - (34%) Gaps:181/633 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RDGESEDDEGNSKGNDRSECFFAGKGTAL------VLALKDIPPLTQSERRLSTDSTRSSNSTQS 78
            |.|.......:|.....|..|...:||:.      .:.||.:...      |||.||.:::|:.|
Zfish   355 RRGRGHTAGCHSHNTSPSSSFSHAQGTSATNGGGGTMGLKTLGGC------LSTASTTNTSSSNS 413

  Fly    79 NNSDIQLHLQSMFYLLQREDTLKMAVKLESQRSNRTRYLVIASRSCCRSGTSDRRRHRIMRHHSV 143
            ..||.                          |:...|.|..||.|....|.......|     ..
Zfish   414 TVSDC--------------------------RTGLLRPLGCASCSGEAGGFESPAAFR-----KK 447

  Fly   144 KVGG--SAGTKSSTSPAVPTQRQLS-----VEQTATEASSKCDKTADKENATAAGDNKNTSGMEE 201
            .|||  .....||::|....|..:|     ..||.:...|.|  ::|....|......|...|..
Zfish   448 LVGGCLPCAPLSSSAPLRALQSCVSGCNPKASQTGSSTCSYC--SSDPIVVTFNPHRGNPPNMGH 510

  Fly   202 SCLLGIDCNERTTIGLVVPILADTTIHLDGDGGFSVKVYEKTHIFKPVSVQAMWSALQTLHKVSK 266
            :  :|..     |:|...|          .|..:||:......:.|.::    .|..|.:|..|.
Zfish   511 N--VGAH-----TMGRYQP----------DDDDYSVRTIWPEELAKKMT----RSKTQPIHHNSG 554

  Fly   267 KAR------EN----------------------------------------NFYASGPSHDWLSS 285
            ..|      :|                                        :|..||.|.|....
Zfish   555 SGRTCMGHNQNSGNGGNPVILDCRNLMEFTRSQLTDQAGRRRLQQGKMAVLDFIGSGSSGDQGRD 619

  Fly   286 YERRI--ESDQSCLNEWNAMD-----ALESRRPPSPDA--------------IRNKPPEKE---- 325
            ..:|:  :...:|:.:.|..|     ...|.|.||||:              |:.||.::|    
Zfish   620 SLKRLWNKGADACMGDGNGFDDEVLPQSPSLRSPSPDSPPSFSPPPSAPTTLIKPKPKQREREGG 684

  Fly   326 ----ETESVIKMKLKAIMMSVDLDEVTSKYIRGRLEEILDMDLGEYKSFIDAEMLVILGQMDAPT 386
                .|:|     |..::.|::.::...   .||:...|.:......|..|..::....:....:
Zfish   685 HTLPSTQS-----LHLVLNSLNREQDEE---NGRVHLSLPLSSSLPASLSDESVMTPDVENAVIS 741

  Fly   387 KIFEHVYLGSEWNASNLEELQKNGVRHILNVTREIDNFF--PGTFEYFNVRVYDDEKTNLLKYWD 449
            .|...::||:|.:|.:|:.|....:..::|||..:..:.  .|...|..:...|:.|.||.:|::
Zfish   742 PILPFLFLGNERDAQDLDLLLHLNIGFVVNVTTHLPLYHLDTGLVRYKRLPATDNSKQNLRQYFE 806

  Fly   450 DTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLN 514
            :.|.:|..|...|..|||||:.||||||::||||.||........|.::|:.||..:.||.||:.
Zfish   807 EVFEFIEEAHQCGRGVLVHCQAGVSRSATIVIAYLMKHTLMTMTDAYKYVRGRRPIVSPNLNFMG 871

  Fly   515 QLETYSGMLDAMKNKEKLQRSKSETNLKSTKDARLLPGSEPTPLIQAL 562
            ||..:                  |.:|.|....|:|     ||.:..|
Zfish   872 QLLEF------------------ERDLNSGVTPRIL-----TPKLSGL 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166 66/357 (18%)
DEK_C 326..379 CDD:462592 9/52 (17%)
DSP_slingshot 385..523 CDD:350363 48/139 (35%)
si:dkey-175m17.7XP_001345798.2 None

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