DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssh and dusp28

DIOPT Version :10

Sequence 1:NP_733063.1 Gene:ssh / 42986 FlyBaseID:FBgn0029157 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_001344320.3 Gene:dusp28 / 100005205 ZFINID:ZDB-GENE-131127-257 Length:156 Species:Danio rerio


Alignment Length:140 Identity:49/140 - (35%)
Similarity:70/140 - (50%) Gaps:10/140 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 NASNLEELQKNGVRHILNVTREIDNFFPGT-FEYFNVRVYDDEKTNLLKYWDDTFRYITRAKAEG 462
            :|.|.:.:||..|...:||:::  ..||.. .....|.||||...:|.:|:|.....|......|
Zfish    18 SACNNDLIQKEAVTLCINVSKQ--QPFPSARVSTLRVPVYDDPNEDLYRYFDRCADAIASEAGRG 80

  Fly   463 SKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGMLDAMK 527
            .:.:|:||.|.||||:|.:||.||........|.:.||..||.::||..|.:|||.|...|    
Zfish    81 GRTVVYCKNGRSRSATVCVAYLMKHQSLTLTDAFQVVKSARSVVEPNPGFWSQLERYEQEL---- 141

  Fly   528 NKEKLQRSKS 537
               |::||.|
Zfish   142 ---KIRRSGS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sshNP_733063.1 SSH-N 21..313 CDD:212166
DEK_C 326..379 CDD:462592
DSP_slingshot 385..523 CDD:350363 44/124 (35%)
dusp28XP_001344320.3 DUSP28 4..142 CDD:350422 45/132 (34%)
Blue background indicates that the domain is not in the aligned region.

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