DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Osbp and Osbp

DIOPT Version :9

Sequence 1:NP_477271.1 Gene:Osbp / 42985 FlyBaseID:FBgn0020626 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001028346.1 Gene:Osbp / 76303 MGIID:97447 Length:805 Species:Mus musculus


Alignment Length:806 Identity:387/806 - (48%)
Similarity:500/806 - (62%) Gaps:107/806 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AAGNALAEKGLPEMKGWLLKWTNYIKGYQRRWFVLSKGVLSYYRNQSEINHTCRGTISLHGALIH 68
            |.|:..|.      :|||.|||||||||||||||||.|:|||||:::|:.|||||||:|..|.|.
Mouse    82 AGGSGSAR------EGWLFKWTNYIKGYQRRWFVLSNGLLSYYRSKAEMRHTCRGTINLATANIT 140

  Fly    69 TVDSCTFVISNGGTQTFHIKAGTEVERQSWVTALELAKAKAIRAI-ECEEEEETETAHVVPSQEI 132
            ..|||.|:|||||.||:|:||.:|||||.||||||||||||::.: |.::..:.|:.......|:
Mouse   141 VEDSCNFIISNGGAQTYHLKASSEVERQRWVTALELAKAKAVKMLAESDDSGDEESVSQTDKTEL 205

  Fly   133 SSVVRDLTDRLESMRTCYDLITKHGAALQRALNDLETNE--EESLGSRTKIVNERATLFRITSNA 195
            .|.:|.|:.::|.:.||.|||.|||.||||:|::||:.:  .|| ..:.|.||||||||||||||
Mouse   206 QSTLRTLSSKVEDLSTCNDLIAKHGTALQRSLSELESLKLPAES-NEKIKQVNERATLFRITSNA 269

  Fly   196 MINAGNDYLHTAEAQGHKWSKMLHHEREQRQRLEEIIEQMAKQQSQMEQA---AVLVRQNKPVSS 257
            ||||..|:|..|:....||.|.|.:||:||.||||.:||:|||.:.:|:|   |.::..|.|.|:
Mouse   270 MINACRDFLMLAQTHSKKWQKSLQYERDQRIRLEETLEQLAKQHNHLERAFRGATVLPANPPGSA 334

  Fly   258 TSG----AGTAGSLVTSDEEMEFFDAEE---------HGYSGSGRSPESSDCERGTFILKMHKRR 309
            .||    ....|.:...|:|.|||||.|         |..:||..|..|||.             
Mouse   335 GSGKDQCCSGKGDMSDEDDENEFFDAPEIITMPENLGHKRTGSNISGASSDV------------- 386

  Fly   310 SSSEDQVEGHLEGSSSESDEQKRTVQTVQQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIY 374
             |.::|.:..||    |:.::|||                                         
Mouse   387 -SLDEQYKHQLE----ETKKEKRT----------------------------------------- 405

  Fly   375 GRNWNPDLIKKRRDRVPDKPNHPISLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTE 439
                          |:|.|||:.::||.||||||||:|||||||:||||||||||||.||.||.|
Mouse   406 --------------RIPYKPNYSLNLWSIMKNCIGKELSKIPMPVNFNEPLSMLQRLTEDLEYHE 456

  Fly   440 ILDYAATCQDECEQLAYIAAFTVSAYATTTNRTGKPFNPLLGETYECDRMDDYGWRCLAEQVSHH 504
            :||.||.|::..|||.|:||||||:|:||..||.||||||||||:|.||:::.|:|.:.||||||
Mouse   457 LLDRAAKCENSLEQLCYVAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLEENGYRSICEQVSHH 521

  Fly   505 PPVAALHCESKN-WTCWQEFSMTSKFRGKYVQINPLGGVYVQFPNSGRRYSWRKVTTTVNNIIVG 568
            ||.||.|.|||| ||..||..:||||||||:.|.|||.::..|.::|..|:|:||||||:|||||
Mouse   522 PPAAAHHAESKNGWTLRQEIKITSKFRGKYLSIMPLGTIHCIFHSTGHHYTWKKVTTTVHNIIVG 586

  Fly   569 KLWVDQHGEMEIRGSQAAEGHKCILNFIPYSYFSRDVQRSVKGVVMNKDNEVKWVVRGTWDMKIE 633
            |||:||.||::|...:.  |.||.|.|:|||||||||.|.|.|.|.:...:|.:.:.||||.|::
Mouse   587 KLWIDQSGEIDIVNHKT--GDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMD 649

  Fly   634 IAPVLKTSGSVSSPTYTTGEFK-----LAWRRRPAPPDSDKFYNFTTLACQLNEEEEGVAPTDSR 693
            ...|...||.........|...     :.|:|.|.|.:::..|.|:.||..||..|.|.||||||
Mouse   650 CFKVQAASGENGGDARQRGHEAEDSRVMLWKRNPLPKNAENMYYFSELALTLNAWEGGTAPTDSR 714

  Fly   694 LRPDQRLMEQGDWDESNKEKLRLEEKQRTERRRRENEAEEAAAEGRPYPAYEPMWFKREKEEGSE 758
            |||||||||.|.|||:|.||.|||||||..|::||.||.:|..:|.|:..|:.:||:|:|:..:.
Mouse   715 LRPDQRLMENGRWDEANAEKQRLEEKQRLSRKKREAEAAKATEDGTPHDPYKALWFERKKDPVTR 779

  Fly   759 EYVHVFKNTYWEAKAAQNFEGCPDIY 784
            |..|::...|||.|..|::..||||:
Mouse   780 ELTHIYSGEYWECKEKQDWGSCPDIF 805

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
OsbpNP_477271.1 PH 15..107 CDD:278594 64/91 (70%)
PH_OSBP_ORP4 17..113 CDD:270101 68/95 (72%)
Oxysterol_BP 399..764 CDD:279564 207/370 (56%)