DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Osbp and osbpl6

DIOPT Version :9

Sequence 1:NP_477271.1 Gene:Osbp / 42985 FlyBaseID:FBgn0020626 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_002935731.2 Gene:osbpl6 / 734134 XenbaseID:XB-GENE-987246 Length:902 Species:Xenopus tropicalis


Alignment Length:958 Identity:259/958 - (27%)
Similarity:399/958 - (41%) Gaps:298/958 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GNALAEKGLPEM-KGWLL---KWTNYIKGYQRRWFVLSKGVLSYYRNQSEINHTCRGTISLHGAL 66
            |.:..:|  ||. :|::|   ||.  :||:.:|:|||..|:|.|  ::|.|: |.:|  .|||  
 Frog    48 GQSSVQK--PEKHEGFMLKKRKWP--LKGWHKRFFVLDNGILKY--SKSPID-TQKG--KLHG-- 101

  Fly    67 IHTVDSCTFVIS----------NGGTQTFHIKAGTEVERQSWVTAL------------------- 102
              ::|....|:|          :.....:|:|..:.....:||:.|                   
 Frog   102 --SIDVGLSVMSIKKKARRIDLDTEENIYHLKVKSPDTFDAWVSKLRHHRLYRQNEIVRSPRDAS 164

  Fly   103 ----------ELAKAKAIRAIE-----------------------CEEEEETETAHVVPSQEISS 134
                      |.:.|..:...|                       |...:....|.::.|:|:..
 Frog   165 LHMFPSTSTTESSPAANVTVPEGKVPQNNFLWQSPIPCSNSLPATCTTGQSKVAAWLLDSEEMDK 229

  Fly   135 VVRDL----TDRLESMRTCYDLITKHGAALQRALN-----DLETN--------EEESLGSRTKIV 182
            ...||    ::.:|..:..::|     ..|||..:     |::.|        :..|...|||.|
 Frog   230 CAEDLAQCQSNLIELSKLLHNL-----ELLQRTQSAPNFIDMQANCVDISKKDKRASRRWRTKSV 289

  Fly   183 NERATL---------------------------FRITSNAMINA---GNDY-------------- 203
            ::.|.:                           |:...:.:::|   .:||              
 Frog   290 SKDAKIQLQVPHSASMSPVRLHASNPNLYADVEFQNPPSHVVDAMEFASDYTKLQEEFCLIAQKV 354

  Fly   204 -------LHTAEAQGHKWSKM-----------------------LHHEREQRQRLEEI------- 231
                   .:|...:..|..:|                       |:|..|.|.||..|       
 Frog   355 HSLLKSAYNTIAIEKEKMKQMVSDQDYSGQSTQIARLRQSLSQALNHNSELRSRLNRIHTESVIS 419

  Fly   232 -----IEQMAKQQSQMEQAAVLVRQNKPVSSTSGAGTAGSLVTSDEEMEFFDAEEHGYSGSGRSP 291
                 :..:|......|...|.:..::.||:      .|.|..|:...|||||:|...|.|....
 Frog   420 DQVVSVNIIASSDESCEPMHVSLPLSQQVSN------EGRLSMSESVSEFFDAQEVLLSASSSEN 478

  Fly   292 ESSDCERGTFILKMHKRRSSSEDQVEGHLEGSSSESDEQKRTV----------QTVQQVCLVSAP 346
            |:||.|  ::|       |...|.:.   |.::|.:|...|.:          :|.::.|     
 Frog   479 EASDDE--SYI-------SDVSDNIS---EDNTSVADNVSRQILNGELLGGAFRTGRRTC----- 526

  Fly   347 RVASGGQGDDDDDVDKALPAKESTDSIYGRNWNPDLIKKRRDRVPDKPNHPISLWGIMKNCIGKD 411
                             |||..                      ||..|  |:||.|::|.||||
 Frog   527 -----------------LPAPS----------------------PDTSN--INLWNILRNNIGKD 550

  Fly   412 LSKIPMPINFNEPLSMLQRLVEDYEYTEILDYAATCQDECEQLAYIAAFTVSAYATTTNRTG-KP 475
            |||:.||:..||||:.||.|.|:.||:|:||.||...|..|::|.||||.||.||:|..|.| ||
 Frog   551 LSKVSMPVELNEPLNTLQHLCEELEYSELLDKAAETDDPHERMALIAAFAVSGYASTYYRAGSKP 615

  Fly   476 FNPLLGETYECDRMDDYGWRCLAEQVSHHPPVAALHCESKNWTCWQEFSMTSKFRGKYVQINPLG 540
            |||:|||||||.| :|.|:|..:||||||||::|.||||||:..||:....:||.||.::|.|.|
 Frog   616 FNPVLGETYECIR-EDKGFRFFSEQVSHHPPISACHCESKNFVFWQDIRWKNKFWGKSMEILPFG 679

  Fly   541 GVYVQFPNSGRRYSWRKVTTTVNNIIVGKLWVDQHGEMEIRGSQAAEGHKCILNFIPYSYFSRDV 605
            .|.|..|..|..|.|.||||.::||:.|:.|::.:||:.||.::.... .|.:.||..||::...
 Frog   680 TVNVTLPKYGDCYIWNKVTTCIHNILSGRRWIEHYGEITIRNTKNCVS-MCKMTFIKGSYWNSSA 743

  Fly   606 QRSVKGVVMNKDNEVKWVVRGTWDMKIEI--APVLKTSGSVSSPTYTTGEFKLAWRRRPAPPDSD 668
             ..|.||||:::.:|...:.|.|...:..  ||..                |..||....|.:.:
 Frog   744 -NEVHGVVMDQEGKVVHRLFGKWHEGLYCGDAPAA----------------KCIWRPGSMPTNYE 791

  Fly   669 KFYNFTTLACQLNEEE----EGVAPTDSRLRPDQRLMEQGDWDESNKEKLRLEEKQRTERRRREN 729
            .:|.||..|.:|||.:    :.:..||:|.||||||:|:|:.:.:..||.|:||.||:.|:..|.
 Frog   792 LYYGFTRFAIELNELDPVLKDFLPLTDARFRPDQRLLEEGNVEAAAMEKQRIEELQRSRRKCMEE 856

  Fly   730 EAEEAAAEGRPYPAYEPMWFKREKEEGSEEYVHVFKNTYWEAKAAQNF 777
            :..|          |...:|::..:...:| :.:..:||||.:....|
 Frog   857 DHVE----------YTTKYFRKVIDFHQKE-MWISNDTYWELRKDPGF 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OsbpNP_477271.1 PH 15..107 CDD:278594 31/134 (23%)
PH_OSBP_ORP4 17..113 CDD:270101 30/138 (22%)
Oxysterol_BP 399..764 CDD:279564 150/371 (40%)
osbpl6XP_002935731.2 PH_ORP3_ORP6_ORP7 35..157 CDD:270104 32/121 (26%)
Oxysterol_BP 538..886 CDD:395990 152/377 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542090at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X203
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.