DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Osbp and osbpl3a

DIOPT Version :9

Sequence 1:NP_477271.1 Gene:Osbp / 42985 FlyBaseID:FBgn0020626 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_005170085.1 Gene:osbpl3a / 447908 ZFINID:ZDB-GENE-040912-77 Length:813 Species:Danio rerio


Alignment Length:845 Identity:255/845 - (30%)
Similarity:385/845 - (45%) Gaps:179/845 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PEMKGWLL----KWTNYIKGYQRRWFVLSKGVLSYYRNQSEINH-TCRGTISLHGALIHTVDSCT 74
            ||.:..||    ||.  :||:.:|:|:|.:|:|:|.:..|::.. ..||.|.:..:::.......
Zfish    57 PEKQEGLLLKKRKWP--MKGWHKRYFLLERGILTYAKTGSDLKKGRLRGRIDVGLSVMAMKKKSM 119

  Fly    75 FVISNGGTQTFHIKAGTEVERQSWVTAL---------ELAKAKAIRAIECE--EEEETETAHVVP 128
            .:..:.....:|:||.|......||..|         |:|.....|.::.:  ...:......:.
Zfish   120 CIDLDTEDSIYHLKAKTRSLFDLWVMQLRHHRIFRQNEIAMEPPERQLQSDPASSRQCPQRSFIS 184

  Fly   129 SQEISSVVRDLTDRLESMRTCY-DLITKHGAALQRALNDLETNEEESLGSRTKIVNERATLFRIT 192
            .|..:.:..:.....:.|..|| ||.....:.|:  ||.|..|.|              .|.|..
Zfish   185 MQPSALLKNNWRQNSQDMEKCYKDLSECESSLLE--LNLLLKNME--------------VLHRTF 233

  Fly   193 SNAMINAGNDYLHTAEAQGHKWSKMLHHEREQRQRLEE---------------IIEQMAKQQSQM 242
            |...||.........|.:|||..|..::.:|.:..|:.               :..:.....|.:
Zfish   234 SAPAINLLQSEGSKKEKRGHKKWKSKNYSKENKNALQNPDAPSSRLHVSHPNLVYSEPVSPDSCL 298

  Fly   243 EQAAVLVRQNKPVSSTSG----------AGT-------AGSLVTSDEE-----MEFFDAEEHGYS 285
            |         .|.|.|..          |||       |.||:.|:.:     ::|. :|:..:.
Zfish   299 E---------SPDSPTEASRMQEEFCRLAGTVHSTLRSAYSLLCSERDRVKNTLDFI-SEKDVFD 353

  Fly   286 GSGRSPESSDCE-RGTFILKMHKRRSSSE--DQVEGHLEGSSSESDEQKRTVQTVQQVCLVSAPR 347
            ||....:....| ||:.      ..|.||  |..|..|.||||:::              ||   
Zfish   354 GSRPLLQQMSSESRGSI------PESMSEFFDAKEYLLSGSSSDNE--------------VS--- 395

  Fly   348 VASGGQGDDDDDVDKALPAKESTDSIYGRNWNPDLIK-------------KRRDRVPD-KPNHPI 398
                   |||..|.   ...:||...:.||.|.::.:             .||.|:|. :.|..:
Zfish   396 -------DDDSYVS---DVSDSTSVEFCRNENGNMREIFVSSGNGNESAVMRRARLPSARMNESV 450

  Fly   399 SLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTEILDYAATCQDECEQLAYIAAFTVS 463
            :||.|:::.|||||||:.||:..|||::.||||.|:.||..:||.||...|...::.|||||.:|
Zfish   451 NLWSILRSNIGKDLSKVAMPVQLNEPMNTLQRLCEEVEYCHLLDTAANTHDPHMRMVYIAAFAIS 515

  Fly   464 AYATTTNRT-GKPFNPLLGETYECDRMDDYGWRCLAEQVSHHPPVAALHCESKNWTCWQEFSMTS 527
            |||.:..|. ||||||:||||:||.|.|. |:|.:||||||||||:|.|||||::|.||:....:
Zfish   516 AYACSFTRAGGKPFNPILGETFECMRADK-GFRFIAEQVSHHPPVSACHCESKSYTFWQDMRWKN 579

  Fly   528 KFRGKYVQINPLGGVYVQFPNSGRRYSWRKVTTTVNNIIVGKLWVDQHGEMEIRGSQ-AAEGHKC 591
            ||.||.::|.|:|..:::.|..|.||.|.|||:.::||:.|:.|::.:|||.|:.|. ..:...|
Zfish   580 KFWGKSMEIVPMGVTHLELPGFGDRYEWSKVTSCIHNILSGQRWIEHYGEMSIKHSNTTGDVSHC 644

  Fly   592 ILNFIPYSYFSRD---VQRSVKGVVMNKDNEVKWVVRGTWDMKIEIAPVLKTSGSVSSPTYTTGE 653
            .:.|:.    ||.   ....|:|:|.:.:..:...:.|.|:..:.:       |...|.|     
Zfish   645 KITFLK----SRSGGLNANEVEGLVTDLEGRIIHSLFGKWNEALYL-------GKPPSAT----- 693

  Fly   654 FKLAWRRRPAPPDSDKFYNFTTLACQLNEEEEG----VAPTDSRLRPDQRLMEQGDWDESNKEKL 714
              ..||..|.|.:.:::|.||..|.||||.|||    :.|||:|.||||||:|:||...:.::|.
Zfish   694 --CIWRANPMPENHEQYYGFTQFAIQLNELEEGLKPLLPPTDTRFRPDQRLLEEGDVAGAEEQKE 756

  Fly   715 RLEEKQRTERRR--RENEAEEAAAEGRPYPAYEPMWFKREKEEGSEEYVHVFKNTYWEAKAAQNF 777
            |:|..|| ||||  :||..           .:.|.:|||.|::     ..|...||||.:....|
Zfish   757 RIEVLQR-ERRRVLQENNM-----------THSPRFFKRAKDD-----TWVSNGTYWELRKDPGF 804

  Fly   778  777
            Zfish   805  804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OsbpNP_477271.1 PH 15..107 CDD:278594 27/105 (26%)
PH_OSBP_ORP4 17..113 CDD:270101 26/109 (24%)
Oxysterol_BP 399..764 CDD:279564 152/375 (41%)
osbpl3aXP_005170085.1 PH_ORP3_ORP6_ORP7 37..159 CDD:270104 26/103 (25%)
PH 59..148 CDD:278594 22/90 (24%)
Oxysterol_BP 451..797 CDD:279564 155/381 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542090at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3013
SonicParanoid 1 1.000 - - X203
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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