DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Osbp and osbpl2b

DIOPT Version :9

Sequence 1:NP_477271.1 Gene:Osbp / 42985 FlyBaseID:FBgn0020626 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_005162004.1 Gene:osbpl2b / 334206 ZFINID:ZDB-GENE-030131-6138 Length:473 Species:Danio rerio


Alignment Length:451 Identity:171/451 - (37%)
Similarity:234/451 - (51%) Gaps:76/451 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 IKKRRDRVPDK--PNHPISLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTEILDYAA 445
            |||||..:|..  ..:..|:|.|:|.|||.:||||.|||.||||||.||||.|..|:|.:|..|.
Zfish    50 IKKRRSCLPAPMFSRNDFSVWSILKKCIGLELSKITMPIVFNEPLSFLQRLTEYMEHTYLLQKAC 114

  Fly   446 TCQDECEQLAYIAAFTVSAYATTTNRTGKPFNPLLGETYECDRMDDYGWRCLAEQVSHHPPVAAL 510
            ...|..|::..:|||.|||.|:..:|||||||||||||||..| :|.|:|.::||||||||::|.
Zfish   115 LQSDSIERMQTVAAFAVSAVASQWDRTGKPFNPLLGETYELTR-EDQGFRLISEQVSHHPPISAF 178

  Fly   511 HCES--KNWTCWQEFSMTSKFRGKYVQINPLGGVYVQFPNSGRRYSWRKVTTTVNNIIVGKLWVD 573
            |.||  .::..........||.||.|:..|.|.:.::.......|:|......|:|:|:||||::
Zfish   179 HTESLMGDFVFHGSIYPKLKFWGKSVEAEPKGTITLELHKHKEAYTWTNPFCCVHNVILGKLWIE 243

  Fly   574 QHGEMEIRGSQAAEGHKCILNFIPYSYFSRDVQRSVKGVVMNKDNEVKWVVRGTW---------- 628
            |:|.:||  ...:.|.||:|||.|...|.:::.| |:|.:.:|..:.:.|:.|.|          
Zfish   244 QYGTVEI--INHSTGEKCVLNFKPCGMFGKELHR-VEGYIQDKSKKKRCVIYGKWTECMWSVDPQ 305

  Fly   629 --------------DMK---------------IEIAPVLKTSGSVSSPTYTTGEFKLAWRRRPAP 664
                          |.|               .|:..|.:|...:...|       |.||....|
Zfish   306 AYEAHRKLEKKGTTDTKKQKQQEEPEAVNEDADEMPEVQETVAVIPGST-------LLWRISSRP 363

  Fly   665 PDSDKFYNFTTLACQLNEEEEG----VAPTDSRLRPDQRLMEQGDWDESNKEKLRLEEKQRTERR 725
            |.|.:.||||..|..|||.|.|    :||||.|||||.|.||.|:.||:::||.|||||||..|:
Zfish   364 PLSAEMYNFTNFAMALNELEPGMEGVLAPTDCRLRPDIRAMENGNMDEASREKERLEEKQRAARK 428

  Fly   726 RRENEAEEAAAEGRPYPAYEPMWFK--REKEEGSEEYVHVFKNTYWEAKAAQNFEGCPDIY 784
            .|....||          :...||:  .....||:::  ::...|::.|    :..|||||
Zfish   429 ERAKNEEE----------WSTRWFQLGTNPYTGSQDW--LYTGGYFDRK----YRNCPDIY 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OsbpNP_477271.1 PH 15..107 CDD:278594
PH_OSBP_ORP4 17..113 CDD:270101
Oxysterol_BP 399..764 CDD:279564 158/411 (38%)
osbpl2bXP_005162004.1 Oxysterol_BP 68..457 CDD:279564 158/411 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1737
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3013
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.