DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11771 and Frem2

DIOPT Version :9

Sequence 1:NP_651314.1 Gene:CG11771 / 42984 FlyBaseID:FBgn0039252 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_766450.2 Gene:Frem2 / 242022 MGIID:2444465 Length:3160 Species:Mus musculus


Alignment Length:622 Identity:109/622 - (17%)
Similarity:209/622 - (33%) Gaps:216/622 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IVLVPEIGEEGPLGEGVLKPDGLPAFSDITIEMCLGAIGQQASAVENSVKALESDL--------- 88
            :|::.::|.  |:.||:.|       .::.:.|.:.|...:.|....|:....|||         
Mouse  2070 VVILDDLGR--PILEGIEK-------FELVLRMPMNAALGEPSKATVSINDSASDLPKMQFKERV 2125

  Fly    89 -----HSGKQLNAASIFRELDTVTGPLETTWGVAKALYLGNSTLIPTKSYMNIHERARNARAAKF 148
                 :.|:.:  |.|:|     :|.::....|......|::.::     |:..||...      
Mouse  2126 YTCNENDGRVV--AMIYR-----SGDIQHRSSVRCYTRQGSAQVM-----MDFEERPNT------ 2172

  Fly   149 CNQTVYKALKDASSDSG-PDEQRMRQKFLLEGKLNGLTLDKDKQDGLKELLTHLGRERAN----- 207
                      |.|:.:. |.|  |.:..:||      .:|....:.::||...||..:.:     
Mouse  2173 ----------DVSTVTFLPGE--MEKPCVLE------LMDDAVYEDVEELRLVLGTPQGSSAFGA 2219

  Fly   208 -----------FKNKVNMAVHSFGQIITDFNLVRDFPPSLLEATARDPGQPMTGPWKITLQPQVV 261
                       .:::.:.||..||:  |.|::.             :|.:|  |...:...|.:.
Mouse  2220 AVGEQNETLIKIQDEADKAVIKFGE--TKFSVT-------------EPSRP--GESVVVKIPVIR 2267

  Fly   262 DGFLKHCPERMQRWNVWRASVLKASSQ-------------------QEKSLENSTHIEKI-RGLR 306
            .|            :..:.|:::..::                   :|...:::..||.| .|:|
Mouse  2268 QG------------DTSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHTVEIEVIFDGVR 2320

  Fly   307 K-RQANLLGYESFADMSMQTKMVGSVDNLKQI-------------FAKLLKFAGPAQSVELEKLQ 357
            : |:|..:..:...:|..:|:...::..:::|             ...||.:..|::..|     
Mouse  2321 EMREAFTVHLKPDENMVAETQATKAIVYIEEIHSMADVTFPSVPHIVSLLIYDDPSKGRE----- 2380

  Fly   358 GFAQDSG------------CEYKLEAYDVAYWRRKQLAAEHGLQDQKLREFF------------- 397
                |:|            |..|...|:    :...:.|...:.|...|..:             
Mouse  2381 ----DTGPVSGYPVVCITACNPKYPDYE----KTGSICASENINDTLTRYRWLISAPAGPDGVTS 2437

  Fly   398 PLPRVLSGLFALSEKLFGI-KIVEQPNAEVWHPAVKFYDVFDADSVNSSTPVGGFYVDCYSKEHK 461
            |:..|....|..|.|:..: .|..||.:.|         ...|.:||::   |...::..|....
Mouse  2438 PMREVDFDTFFTSSKMITLDSIYFQPGSRV---------QCAARAVNTN---GNEGLELMSPIVT 2490

  Fly   462 FGRNNGW----MVGIRNSNKSAGLTPLCALIFNFSEPQSPDAKPPLLGYDDLQMLFKTFGSGLQH 522
            .||..|.    :.|:      .|..|..|.: .::.|:.||       :.:|..|..|    :.|
Mouse  2491 IGREEGLCQPRVPGV------VGAEPFSAKL-RYTGPEDPD-------FANLIKLTVT----MPH 2537

  Fly   523 LLTQAGYSDLAGLSNIEW----DASQVSGHVMSNFLD 555
            :...........|||.|.    |.::|..|..||.||
Mouse  2538 IDGMLPAISTRELSNFELTLSPDGTRVGNHKCSNLLD 2574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11771NP_651314.1 PRK10911 49..720 CDD:182832 104/606 (17%)
Peptidase_M3 264..720 CDD:279740 63/360 (18%)
Frem2NP_766450.2 CSPG 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 312..406
Cadherin_3 376..532 CDD:292802
CSPG 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 431..530
Cadherin_3 500..665 CDD:292802
CSPG 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 553..664
Cadherin_3 634..797 CDD:292802
CSPG 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 689..796
Cadherin_3 763..909 CDD:292802
CSPG 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 817..908
Cadherin_3 879..1026 CDD:292802
CSPG 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 934..1026
Cadherin_3 993..1159 CDD:292802
CSPG 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 1055..1157
Cadherin_3 1125..1273 CDD:292802
CSPG 8. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 1178..1271
Cadherin_3 1241..1390 CDD:292802
CSPG 9. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 1292..1388
Cadherin_3 1359..1503 CDD:292802
CSPG 10. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 1409..1501
Cadherin_3 1471..1612 CDD:292802
CSPG 11. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 1521..1610
Cadherin_3 1581..1742 CDD:292802
CSPG 12. /evidence=ECO:0000255|PROSITE-ProRule:PRU01201 1644..1741
Calx-beta 1760..1847 CDD:295344
Calx-beta 1871..1971 CDD:295344
Calx-beta 1999..2091 CDD:295344 6/29 (21%)
Calx-beta 2117..2209 CDD:295344 20/127 (16%)
Calx-beta 2239..2330 CDD:295344 19/119 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3130..3160
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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