DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-2 and AT2G40520

DIOPT Version :10

Sequence 1:NP_651313.1 Gene:Trf4-2 / 42983 FlyBaseID:FBgn0039251 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_850331.1 Gene:AT2G40520 / 818647 AraportID:AT2G40520 Length:502 Species:Arabidopsis thaliana


Alignment Length:322 Identity:74/322 - (22%)
Similarity:123/322 - (38%) Gaps:105/322 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RSTPTEFCLRAGAVRRIEDVVLSIWPS-----------------------ASVDLFGSFRTGLNL 81
            ::||.|..:...|..|.::::.:|.|:                       ..|.||||......|
plant    24 KTTPIEAEVWLIAEARAQEILCAIQPNYLAERSRNKIISNLQTLLWERLGIEVYLFGSMPLKTYL 88

  Fly    82 PDSDIDLVVYYKFWNPRLLHELQNELVSQGVTDPDTVTVLD----------------KASVPVVK 130
            ||.||||.|        |.|....|..::.|     ..||:                :|.|.|:|
plant    89 PDGDIDLTV--------LTHHASEEDCARAV-----CCVLEAEMGNSDLQVTGVQYVQAKVKVIK 140

  Fly   131 FTDLISRIRFDVTFNSVASGVQAADLIKDFIRHFPE---LPKLVMVLKQFLSLHGFNEVYNSGGV 192
            .:  |..:.||::||.:| |:.|...::...:.|..   ..|.::::|.:..........|||.:
plant   141 CS--IRDVAFDISFNQLA-GLGALCFLEQVDKAFGRDHLFKKSIILVKAWCFYESRILGANSGLI 202

  Fly   193 SSYALTLMVISFLQQHARSNRRLSEHSKLALLLIQFLDYYGRKFDFFKYGISVL----------- 246
            |:|||.::|::.:      |...|..|....:|.:|::||| .||:..|.::|.           
plant   203 STYALAILVLNIV------NMSYSSLSGPLAVLYKFINYYG-SFDWKNYCVTVTGPVPISSLPDI 260

  Fly   247 -----------------------GQGGCVEKARLRSTLGENNWQSVLCIEDPVTPTNDIGRS 285
                                   |:.|.||.:|....:...|      |.||:..:|::|||
plant   261 TETGNHEVFLDEKFFRECMELYSGETGVVEASRKYFPVKYYN------ILDPLKHSNNLGRS 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-2NP_651313.1 TRF4 27..>324 CDD:227585 74/322 (23%)
AT2G40520NP_850331.1 NT_PAP_TUTase 57..158 CDD:143392 29/116 (25%)

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