DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-2 and Mtpap

DIOPT Version :9

Sequence 1:NP_001262941.1 Gene:Trf4-2 / 42983 FlyBaseID:FBgn0039251 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_080433.1 Gene:Mtpap / 67440 MGIID:1914690 Length:585 Species:Mus musculus


Alignment Length:352 Identity:72/352 - (20%)
Similarity:142/352 - (40%) Gaps:92/352 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LHQEIEQFYNYIRSTPTEFCLRAGAVRRIEDVVLSIWPS-------ASVDLFGSFRTGLNLPDSD 85
            :.:::.......:.|.....||......|||:..:.:||       :||:.||.....|:: ..|
Mouse   189 IEEQLNTLLKAFQLTEENIRLRHLTCSLIEDIAAAYFPSCVIRPFGSSVNTFGKLGCDLDM-FLD 252

  Fly    86 ID----LVVYYKFWNPRLLHELQNELVSQGVTDPDTVTVLDK-----------------ASVPVV 129
            :|    |.|:....|..:..:::| :.|:.:.....::|:.:                 |..|:|
Mouse   253 LDETGKLDVHKNTGNFFMEFQVKN-VPSERIATQKILSVIGECLDNFGPGCVGVQKILNARCPLV 316

  Fly   130 KFTDLISRIRFDVTF-NSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSLHGFNEVYNSGGVS 193
            :|:...|..:.|:|. ||:|  :::::|:..:......:..||..::.:...|..........::
Mouse   317 RFSHQGSGFQCDLTANNSIA--LKSSELLYIYGSLDSRVRALVFSVRCWARAHSLTSSIPGAWIT 379

  Fly   194 SYALTLMVISFLQQHA---------------RSNRRLSEHSK------------------LALLL 225
            :::||:|||.|||:.:               ..:|.:.|.:.                  |.||:
Mouse   380 NFSLTVMVIFFLQRRSPPILPTLDSLKSIADAEDRCILEGNNCTFVQDVNKIQPSGNTETLELLI 444

  Fly   226 IQFLDYYGRKFDFFKYGISVLGQGGCVEKARLRSTLGENNW--QSVLCIEDPVTPTNDIGRSSYG 288
            .:|.:|:| .|.|.|..|:: .||            .|.|.  .|.|.|::|...:.:|.::   
Mouse   445 KEFFEYFG-NFAFNKNSINI-RQG------------REQNKPDSSPLYIQNPFETSLNISKN--- 492

  Fly   289 VLGVMQGFGAAFVKLSKLVDSDSSKIV 315
               |.|.....||:|::    ||:.|:
Mouse   493 ---VSQSQLQKFVELAR----DSAWIL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-2NP_001262941.1 NT_PAP_TUTase 52..161 CDD:143392 29/137 (21%)
PAP_assoc 221..280 CDD:281779 18/60 (30%)
MtpapNP_080433.1 NT_PAP_TUTase 209..347 CDD:143392 31/141 (22%)
PAP_assoc 441..486 CDD:281779 17/58 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..585
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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