DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-2 and Tent2

DIOPT Version :9

Sequence 1:NP_001262941.1 Gene:Trf4-2 / 42983 FlyBaseID:FBgn0039251 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_038958452.1 Gene:Tent2 / 361878 RGDID:1306438 Length:510 Species:Rattus norvegicus


Alignment Length:283 Identity:80/283 - (28%)
Similarity:125/283 - (44%) Gaps:69/283 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CLRAGAVRRIEDVVLSIWPSASVD----LFGSFRTGLNLPDSDIDLVVYYK----FWNPR----- 98
            ||.|.|     ||:||  .|||::    |.||...|.....||.||.:..|    |:...     
  Rat   204 CLFAPA-----DVLLS--SSASLESRLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEA 261

  Fly    99 -----LLHELQNELVSQGVTDPDTVTVLDKASVPVVKFTDLISRIRFDVTFNSVASGVQAADLIK 158
                 |:|:.....:|..:..|..:    :|.||:|||.|.:|.:.||:..|:.. |::...|::
  Rat   262 RHILTLVHKHFCTRLSGYIERPQLI----RAKVPIVKFRDKVSCVEFDLNVNNTV-GIRNTFLLR 321

  Fly   159 DFIRHFPELPKLVMVLKQFLSLHGFNEVYNSGGVSSYALTLMVISFLQ----------------- 206
            .:......:..||:|:|::.|.|..|:. :.|.:|||:|.|||:.:||                 
  Rat   322 TYAYLENRVRPLVLVIKKWASHHEINDA-SRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPES 385

  Fly   207 ----------QHARSN--RRLSEH-SKLALLLIQFLDYYGRKFDFFKYGISVLGQGGCVEKARLR 258
                      .||..|  ..||:: |.|..||:.||.||..:||:....||       |.:|:..
  Rat   386 FSTSVQLHLVHHAPCNVPPYLSKNESSLGDLLLGFLKYYATEFDWNTQMIS-------VREAKAI 443

  Fly   259 STLGENNWQS-VLCIEDPVTPTN 280
            ....:..|:: .:|:|:|...||
  Rat   444 PRPDDMEWRNKYICVEEPFDGTN 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-2NP_001262941.1 NT_PAP_TUTase 52..161 CDD:143392 35/126 (28%)
PAP_assoc 221..280 CDD:281779 17/59 (29%)
Tent2XP_038958452.1 TRF4 <224..>494 CDD:227585 69/256 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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