DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-2 and Tent4b

DIOPT Version :10

Sequence 1:NP_651313.1 Gene:Trf4-2 / 42983 FlyBaseID:FBgn0039251 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001401942.1 Gene:Tent4b / 307745 RGDID:1309587 Length:700 Species:Rattus norvegicus


Alignment Length:429 Identity:161/429 - (37%)
Similarity:228/429 - (53%) Gaps:62/429 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PWQLPDVVYGNGIPALCLLHQEIEQFYNYIRSTPTEFCLRAGAVRRIEDVVLSIWPSASVDLFGS 74
            ||:..:  |..|:..   ||:||..||.|:...|.|..:|...|.|||.|:..:||||.|.:|||
  Rat   188 PWKRRN--YNQGVVG---LHEEISDFYEYMSPRPEEEKMRMEVVSRIESVIKELWPSADVQIFGS 247

  Fly    75 FRTGLNLPDSDIDLVVYYKFWNPRLLHELQNELVSQGVTDPDTVTVLDKASVPVVKFTDLISRIR 139
            |:|||.||.|||||||:.| |....|..|:..|....|.|.|:|.|||||:||::|.||..:.::
  Rat   248 FKTGLYLPTSDIDLVVFGK-WENLPLWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVK 311

  Fly   140 FDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSLHGFNEVYNSGGVSSYALTLMVISF 204
            .|::|| |.:||:||||||||.:.:|.||.||:||||||.....|||: :||:.||:|.||.:||
  Rat   312 VDISFN-VQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEVF-TGGIGSYSLFLMAVSF 374

  Fly   205 LQQHARSNRRLSEHSKLALLLIQFLDYYGRKFDFFKYGISVLGQGGCVEKARLRSTLGENNWQSV 269
            ||.|.|.:..: .::...:|||:|.:.|||.|::.|.||.:...|..|.|..::..:.:....|:
  Rat   375 LQLHPREDACI-PNTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSM 438

  Fly   270 LCIEDPVTPTNDIGRSSYGVLGVMQGFGAAFVKLSKLV--------DSDSSKIVGPILANIVEVP 326
            |.||||:.|.||:||||||.:.|.|.|..|:|.||..|        ::::..|:|    .|:.|.
  Rat   439 LYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKCYPNNETESILG----RIIRVT 499

  Fly   327 QSIINYRAWVHYNFQHLLTPELPC-----------------------------------ADSLVQ 356
            ..:..||.|:...:.....||..|                                   ::||.:
  Rat   500 DEVTTYRDWISKQWGLQNRPEPSCNGNGVTLIVETQQLDKCNNNLSEENEAPGKCRSKASESLSK 564

  Fly   357 PSPTGSTSPSASASASEDERS--GGPATIGFGRCDDPPQ 393
            .|...|:.|.:|:||::...|  ...||    .|..|.|
  Rat   565 HSSNSSSGPVSSSSATQSSSSDVDSDAT----PCKTPKQ 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-2NP_651313.1 TRF4 27..>324 CDD:227585 136/304 (45%)
Tent4bNP_001401942.1 TRF4 201..>522 CDD:227585 142/328 (43%)

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