Protein Alignment Trf4-2 and cid12

DIOPT Version :10

• Sequence 1: NP_651313.1
• Gene: Trf4-2 / 42983
• FlyBaseID: FBgn0039251
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_588273.1
• Gene: cid12 / 2539423
• PomBaseID: SPCC663.12
• Length: 336
• Species: Schizosaccharomyces pombe
• Alignment Length: 289
• Identity: 72/289 - (24%)
• Similarity: 130/289 - (44%)
• Gaps: 34/289 - (11%)

  Fly    56 IEDVVLSIWPSASVDLFGSFRTGLNLPDSDIDLVVYYKFWNPRL--LHELQNELVSQGVTDPDTV 118
            |.:|||    .|.:.::||...|..|..||:|:    ...:||:  |.:.:..:|.:...|.| .
pombe    52 IREVVL----DAELQVYGSMYIGTTLSISDVDV----SLKSPRVGELEKRRVTMVLRKYLDAD-A 107

  Fly   119 TVLDKASVPVVKFTDLISRIRFDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSLHGF 183
            .....|.||.:...| :|.|..|:||.: ....:.|:|.|.:....|...:|:|:||.:|.....
pombe   108 DFHSSARVPRINLVD-VSGIGVDLTFGN-DKACRTAELQKAYNEEHPIFGRLLMLLKHWLFERDL 170

  Fly   184 NEVYNSGGVSSYALTLMVISFLQQHARSNRRLSEHSKLALLLIQFLDYYGRKFDFFKYGISVLGQ 248
            ..|:: ||::|.||:.|:|.:|:.........||...:..||.:|..::|.::.:..:.:..| .
pombe   171 ENVHH-GGIASCALSYMLIGWLEMRFHKKGIDSEVQPIRALLQKFFYFWGVEWTYELFVLRPL-T 233

  Fly   249 GGCVEKARLRSTLGENNW-----QSVLCIEDPVTPTNDIGRSSYGVLGVMQGFGAAFVKL----- 303
            |..|.|.       :..|     .::|.||||:...||||:.|:.:..:...|.|:..:|
pombe   234 GQIVPKL-------QKGWLNEVQPNLLSIEDPIDRNNDIGKQSFQISMIKAAFVASANELLSDKT 291

  Fly   304 --SKLVDSDSSKIVGPILANIVEVPQSII 330
              |....::....:.....|::...:|::
pombe   292 WFSTFAITEDEMFLCKQFENVINTKRSLV 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf4-2	NP_651313.1	TRF4	27..>324	CDD:227585	71/281 (25%)
cid12	NP_588273.1	TRF4	1..336	CDD:227585	72/289 (25%)