DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trf4-2 and LOC1281604

DIOPT Version :10

Sequence 1:NP_651313.1 Gene:Trf4-2 / 42983 FlyBaseID:FBgn0039251 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_321547.4 Gene:LOC1281604 / 1281604 VectorBaseID:AGAMI1_009307 Length:1041 Species:Anopheles gambiae


Alignment Length:359 Identity:173/359 - (48%)
Similarity:231/359 - (64%) Gaps:26/359 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PWQLPDVVYGNGIPALCLLHQEIEQFYNYIRSTPTEFCLRAGAVRRIEDVVLSIWPSASVDLFGS 74
            ||:.|:..||.||..   |||||||||.::.:||||..||...|.|||.:|.::||||.|::|||
Mosquito   256 PWRPPNFKYGRGIIG---LHQEIEQFYAHMIATPTEHALRVMVVSRIEKIVQNLWPSARVEMFGS 317

  Fly    75 FRTGLNLPDSDIDLVVYYKFWNPRLLHELQNELVSQGVTDPDTVTVLDKASVPVVKFTDLISRIR 139
            |||||.||.|||||||..: |....|..|:.||:|||:.:|::|.||||||||:||.||..::::
Mosquito   318 FRTGLYLPTSDIDLVVIGQ-WTMLPLRTLEMELISQGIAEPNSVRVLDKASVPIVKLTDRQTQVK 381

  Fly   140 FDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSLHGFNEVYNSGGVSSYALTLMVISF 204
            .|::|| :.||||:|.|||.|.|.:|.|.|||:||||||.....|||: :||:|||:|.||.|||
Mosquito   382 VDISFN-MESGVQSAKLIKGFKREYPVLEKLVLVLKQFLLQRDLNEVF-TGGISSYSLILMCISF 444

  Fly   205 LQQHARSNRRLSEHSKLALLLIQFLDYYGRKFDFFKYGISVLGQGGCVEKARLRSTLGENNWQSV 269
            ||||   :::.:..|.|.:|||:|.:.|||||::.|.|||| ..|..:.|..|:..:.:.:..|:
Mosquito   445 LQQH---HQKPNACSNLGVLLIEFFELYGRKFNYMKIGISV-KSGRYIPKEELQREMIDGHRPSL 505

  Fly   270 LCIEDPVTPTNDIGRSSYGVLGVMQGFGAAFVKLSKLV--------DSDSSKIVGPILANIVEVP 326
            ||||||:||.|||||||||.|.|.|.|..|::.|.:.|        |.:...|:|    .|:.|.
Mosquito   506 LCIEDPLTPGNDIGRSSYGALHVKQAFEYAYIVLVQAVLPLDKNLNDCNRQSILG----RIIRVT 566

  Fly   327 QSIINYRAWVHYNFQHLLTPELPCADSLVQPSPT 360
            ..:|.||.|:...|:..|..:    .||.||..|
Mosquito   567 DEVIEYRKWIKDTFEDKLIRQ----PSLQQPLTT 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-2NP_651313.1 TRF4 27..>324 CDD:227585 154/304 (51%)
LOC1281604XP_321547.4 None

Return to query results.
Submit another query.