DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-2 and Tent2

DIOPT Version :9

Sequence 1:NP_001262941.1 Gene:Trf4-2 / 42983 FlyBaseID:FBgn0039251 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001348466.1 Gene:Tent2 / 100715 MGIID:2140950 Length:484 Species:Mus musculus


Alignment Length:303 Identity:79/303 - (26%)
Similarity:131/303 - (43%) Gaps:68/303 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LHQEIEQFYNYIRSTPT-----EFCLRAGAVRRIEDVVLSIWPSASVDLFGSFRTGLNLPDSDID 87
            |.|:|.:.:...:...:     |.| ||...|.|:    .::|.:.:.|.||...|.....||.|
Mouse   156 LSQQILELFETCQQQASDLKKKELC-RAQLQREIQ----LLFPQSRLFLVGSSLNGFGARSSDGD 215

  Fly    88 LVVYYK----FWNPR----------LLHELQNELVSQGVTDPDTVTVLDKASVPVVKFTDLISRI 138
            |.:..|    |:...          |:|:.....:|..:..|..:    :|.||:|||.|.:|.:
Mouse   216 LCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLI----RAKVPIVKFRDKVSCV 276

  Fly   139 RFDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSLHGFNEVYNSGGVSSYALTLMVIS 203
            .||:..|:.. |::...|::.:......:..||:|:|::.|.|..|:. :.|.:|||:|.|||:.
Mouse   277 EFDLNVNNTV-GIRNTFLLRTYAYLENRVRPLVLVIKKWASHHDINDA-SRGTLSSYSLVLMVLH 339

  Fly   204 FLQ---------------------------QHARSN--RRLSEH-SKLALLLIQFLDYYGRKFDF 238
            :||                           .||..|  ..||:: |.|..||:.||.||..:||:
Mouse   340 YLQTLPEPILPSLQKIYPESFSTSVQLHLVHHAPCNVPPYLSKNESSLGDLLLGFLKYYATEFDW 404

  Fly   239 FKYGISVLGQGGCVEKARLRSTLGENNWQS-VLCIEDPVTPTN 280
            ....||       |.:|:......:..|:: .:|:|:|...||
Mouse   405 NTQMIS-------VREAKAIPRPDDMEWRNKYICVEEPFDGTN 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-2NP_001262941.1 NT_PAP_TUTase 52..161 CDD:143392 30/122 (25%)
PAP_assoc 221..280 CDD:281779 17/59 (29%)
Tent2NP_001348466.1 Nuclear localization signal. /evidence=ECO:0000255 76..92
TRF4 121..>468 CDD:227585 79/303 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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