DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11168 and caskin2

DIOPT Version :9

Sequence 1:NP_001262939.1 Gene:CG11168 / 42981 FlyBaseID:FBgn0039249 Length:863 Species:Drosophila melanogaster
Sequence 2:XP_009304988.1 Gene:caskin2 / 564253 ZFINID:ZDB-GENE-041001-137 Length:1308 Species:Danio rerio


Alignment Length:811 Identity:205/811 - (25%)
Similarity:335/811 - (41%) Gaps:221/811 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKDQHLLEASRAGDIKTVDKLLEHSSKRHGPLSSFRRSPSINCQDMNGYTSLHHACLNGHSNIV 65
            |||:|.||.|.:.||:....|||.........|....:..::|.||.:|:::||||.|.|.::::
Zfish     1 MGKEQDLLLAVKNGDLPLAHKLLAKIKTNRNKLLGSTKRLNVNYQDQDGFSALHHAALTGTTDLL 65

  Fly    66 RLLLSHNALLDVPDIRGSTPLFLAAWAGHQDIVKMLLMHSPTGANPNAQTIENETPLHSGAQHGH 130
            .|||...|.:|:.|..|..||..|||.|..|.|.:||.   .||:.|..:.:.:.|||..||:||
Zfish    66 SLLLEAQATVDIKDSNGMRPLHYAAWQGKADSVLLLLR---AGASVNGASHDGQIPLHLAAQYGH 127

  Fly   131 NAVVAILLSYGADPAIRNNSFQTALDLAAQFGRLQVVQTLLRVYPDLILPYKRLEDDNEELLGCM 195
            ..|..:||.:.::|...|...:|.||||.:||||:|.|.||.....:.|    ||.:..:     
Zfish   128 YDVSEMLLQHQSNPCTVNKVKKTPLDLACEFGRLKVTQLLLNSNMVVAL----LEGNGRD----- 183

  Fly   196 PIKHIFTHTCLHLASRNGHKKVVETLLAAGVDVNILTNAGSALHEAALCGKKSVVVTLLKAGIYV 260
                   :|.||||:|||||.::..||.||:|:|..|.:|:|||||||.||..||..||.|||.|
Zfish   184 -------NTPLHLAARNGHKDIIRLLLKAGIDINRTTKSGTALHEAALYGKTEVVKLLLDAGIDV 241

  Fly   261 HATDGNGRTALDILSDYPPHVTYDIVGAINEFT--QAAREHQKPLVVENGTQSLPKRLYEKNSQR 323
            :..:...:|||||               :|:||  .|::|.::.|...:|...:           
Zfish   242 NIRNTYNQTALDI---------------VNQFTTSHASKEIKQLLRDASGALQV----------- 280

  Fly   324 QKVPPRQRKKQDHQANGLSHSLSSLDIFAKPPENYLQM------KPIIH--QKSCDNMSDF---- 376
                   |..:|:..   .|..::|:|.|......|:.      |..||  |:..|.:..|    
Zfish   281 -------RALKDYWN---LHDPTALNIRAGDVITVLEQHMDGRWKGHIHDSQRGTDRVGFFPPSI 335

  Fly   377 -----RTNGSNLLTSYKPVYKQPMLPSFRMDSDISNGSVPSRSYEYINLLRNGSHSDDNSASTSS 436
                 |.:|..|       .:|..||..|  ..|.:.::||.:..:.      ||:||:....||
Zfish   336 VEVISRRSGGGL-------SRQASLPVQR--HHILSRALPSHNSHHT------SHTDDSYTLYSS 385

  Fly   437 -------NSAVRQQAVATYVEMKLPTPP--VPKP------RTRIN-GEYN--------------- 470
                   ::::.|.:.|      ||..|  :.||      ||.:| |:.|               
Zfish   386 THPTVTHHNSLDQHSGA------LPDSPSALCKPEDIWVLRTSLNAGDRNSIGSAGSMGSSRSAG 444

  Fly   471 -------DYANVVPIEEGSCVAAVDNNNNSNGNGTKLRLVRHSPTPDYPPPTVTEAERTIFNFMQ 528
                   ::.|..|.:..|   ||.:|:....:..:|......||....|.:.....|...:..:
Zfish   445 SGQSTEGNFPNNGPYQSPS---AVQDNSKMPPSAGELLEQNQDPTKHMDPHSGALGRRIPLSSSR 506

  Fly   529 PA---TLRKNSLLEPAESPRTTNSVS--------------SDQVEEYVADIPFAGLFKGSTLNLS 576
            |.   .:.:..||:...:.:..|:|.              ..|:|:|.::...||....:...::
Zfish   507 PGEQHVIHQQLLLDGRHTSKQINAVKRALRDAEAIYQWLCEFQLEQYTSNFLTAGYDVPTISRMT 571

  Fly   577 SDVVDGIGAV-PGDR-------------EFLQS--PS----MVRSAHVQNHRRSLSKQRYSALG- 620
            .:.:..||.. ||.|             |:|..  ||    .:.:..:..:::.|::..|.::. 
Zfish   572 PEDLTAIGVTKPGHRKKISMEIGNLNIPEWLPDYIPSDIGKWLSAIGLPQYQKKLAENGYDSISI 636

  Fly   621 -EDFSASRVWAEIDTI-FENIGNE---------VSTVEQ-------------------------- 648
             :|.:    |.::..| ...:|::         :|.|::                          
Zfish   637 VQDIT----WEDLQEIGITKLGHQKKLMLAVKRLSDVQKARKTQAEGQALLQHRKAPPALELVAI 697

  Fly   649 EVEEFVEDPSS------LSLEDSRQSLHIRD 673
            |..:..:.|||      |:.:||..|:.:::
Zfish   698 EHHDTSDCPSSPLSPKMLTFQDSELSMELQN 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11168NP_001262939.1 Ank_4 6..69 CDD:290365 20/62 (32%)
ANK repeat 7..46 CDD:293786 10/38 (26%)
ANK 43..171 CDD:238125 53/127 (42%)
ANK repeat 48..79 CDD:293786 12/30 (40%)
Ank_2 53..148 CDD:289560 37/94 (39%)
ANK repeat 81..115 CDD:293786 14/33 (42%)
ANK 112..254 CDD:238125 58/141 (41%)
ANK repeat 117..148 CDD:293786 11/30 (37%)
Ank_2 122..230 CDD:289560 42/107 (39%)
ANK repeat 204..232 CDD:293786 16/27 (59%)
Ank_5 221..273 CDD:290568 28/51 (55%)
ANK repeat 234..264 CDD:293786 18/29 (62%)
PTB_Anks 688..857 CDD:269972
caskin2XP_009304988.1 Ank_4 7..69 CDD:290365 20/61 (33%)
ANK repeat 7..46 CDD:293786 10/38 (26%)
ANK 43..168 CDD:238125 53/127 (42%)
ANK repeat 48..79 CDD:293786 12/30 (40%)
Ank_2 53..145 CDD:289560 37/94 (39%)
ANK repeat 81..112 CDD:293786 14/33 (42%)
ANK 114..235 CDD:238125 57/136 (42%)
ANK repeat 114..145 CDD:293786 11/30 (37%)
Ank_2 152..245 CDD:289560 50/108 (46%)
ANK repeat 158..213 CDD:293786 27/70 (39%)
ANK repeat 215..245 CDD:293786 18/29 (62%)
ANK repeat 247..281 CDD:293786 12/66 (18%)
SH3_Caskin2 278..339 CDD:212996 13/81 (16%)
Caskin1-CID 414..>451 CDD:293208 5/36 (14%)
SAM_caskin1,2_repeat1 536..600 CDD:188896 10/63 (16%)
SAM 537..589 CDD:197735 10/51 (20%)
SAM_caskin1,2_repeat2 601..671 CDD:188897 11/73 (15%)
SAM 607..668 CDD:197735 8/64 (13%)
Caskin-Pro-rich 904..991 CDD:293512
Caskin-tail 1248..1308 CDD:293238
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0507
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106224
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.710

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