DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11168 and Caskin1

DIOPT Version :10

Sequence 1:NP_651311.2 Gene:CG11168 / 42981 FlyBaseID:FBgn0039249 Length:863 Species:Drosophila melanogaster
Sequence 2:XP_006245957.1 Gene:Caskin1 / 140722 RGDID:620191 Length:1437 Species:Rattus norvegicus


Alignment Length:780 Identity:204/780 - (26%)
Similarity:321/780 - (41%) Gaps:180/780 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKDQHLLEASRAGDIKTVDKLLEHSSKRHGPLSSFRRSPSINCQDMNG-------YTSLHHACL 58
            |||:|.|::|.:|.|:.|..:||:........|....:..::|.||.:|       :::||||.|
  Rat     1 MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGPVLHLPSFSALHHAAL 65

  Fly    59 NGHSNIVRLLLSHNALLDVPDIRGSTPLFLAAWAGHQDIVKMLLMHSPTGANPNAQTIENETPLH 123
            ||::.::.|||...|.:|:.|.:|..||..|||.|.::.:|::|   ..|:..|..:.|...|||
  Rat    66 NGNTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGRKEPMKLVL---KAGSAVNVPSDEGHIPLH 127

  Fly   124 SGAQHGHNAVVAILLSYGADPAIRNNSFQTALDLAAQFGRLQVVQTLL--RVYPDLILPYKRLED 186
            ..|||||..|..:||.:.::|.:.:||.:|.||||.:|||:.|||.||  .:...|:.|   ...
  Rat   128 LAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEP---RPG 189

  Fly   187 DNEELLGCMPIKHIFTHTCLHLASRNGHKKVVETLLAAGVDVNILTNAGSALHEAALCGKKSVVV 251
            |..:..|..|         ||||::|||..::..||.||:|:|..|.:|:||||||||||..||.
  Rat   190 DTTDPNGTSP---------LHLAAKNGHIDIIRLLLQAGIDINRQTKSGTALHEAALCGKTEVVR 245

  Fly   252 TLLKAGIYVHATDGNGRTALDILSDYPPHVTYDIVGAINEFT--QAAREHQKPLVVENGTQSLPK 314
            .||.:||.....:...:|||||               :::||  ||::|              .|
  Rat   246 LLLDSGINAQVRNTYSQTALDI---------------VHQFTTSQASKE--------------IK 281

  Fly   315 RLYEKNSQRQKVPPRQRKKQDHQANGLSHSLSSLDIFAKPPENYLQMKPIIHQKSCDNMSDFRTN 379
            :|..:.|...:|    |..:|:..|   :.|:||::.|......|:..|....|.|  :.|.||.
  Rat   282 QLLREASAALQV----RATKDYCNN---YDLTSLNVKAGDIITVLEQHPDGRWKGC--IHDNRTG 337

  Fly   380 GSNLLTSYKP------VYK--------QPMLPSFRMDSDISNGSV-PSRSYEYINLLRNGSHSDD 429
            ...:  .|.|      :.|        :|..|.       ..||: ||...|.|.:||......|
  Rat   338 NDRV--GYFPSSLGEAIVKRAGSRTGSEPSPPQ-------GGGSLGPSAPPEEIWVLRKPFAGGD 393

  Fly   430 NSASTSSNSAVRQ-------------QAVATYVEMKLPTPPVPKPRTRINGEYNDYANVVPIEEG 481
            .|.|.|:.:..|.             :.:||.:..|..:...|       |:     :.|...||
  Rat   394 RSGSLSNVAGGRSTGGHALHAGAEGVKLLATVLSQKSVSESSP-------GD-----SPVKPPEG 446

  Fly   482 SCVAAVDNNNNSNGNGTKLRLVRHSPTPDYPPPTVTEAERTIFNFMQPATLRKNSLLEPAESPRT 546
            |..||...                       ||.....:  ::....|..|..:|..|...:...
  Rat   447 SSGAARSQ-----------------------PPAAHAGQ--VYGEQPPKKLESSSASEGKSAEAV 486

  Fly   547 TNSVSSDQVEEYVADIPFAGLFKGSTLNLSSDVVDGIGAV-PGDRE-------FLQSPSMVRSAH 603
            :..:::.|::.|..:...||....:...::.:.:..||.. ||.|:       .|..|..:....
  Rat   487 SQWLATFQLQLYAPNFTSAGYDLPTISRMTPEDLTAIGVTKPGHRKKITAEISGLNIPDCLPEHK 551

  Fly   604 VQNHRRSLS----KQRYSALGE------DFSASRVWAEIDTI-FENIGNEVSTV----------E 647
            ..|....||    .|.|..|.:      ||.....|.::..| ...:|::...:          :
  Rat   552 PANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRKLAELQK 616

  Fly   648 QEVEEFVEDPSSLSLEDSRQSLHIRDPAELLLGRKPSAASSNWCHSP--YTF----IYGEIRYSL 706
            .|..::...|.......|.:.:.|..|       .||..::..|.||  .||    :.||::.:|
  Rat   617 AEYSKYEGGPLRRKAPQSLEMMAIESP-------PPSEPAAAECQSPKMTTFQDSELSGELQAAL 674

  Fly   707  706
              Rat   675  674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11168NP_651311.2 ANK repeat 117..148 CDD:293786 13/30 (43%)
ANK repeat 204..232 CDD:293786 13/27 (48%)
ANK repeat 234..264 CDD:293786 17/29 (59%)
PTB_Anks 688..857 CDD:269972 8/25 (32%)
Ank_4 6..69 CDD:372654 20/69 (29%)
ANK repeat 7..46 CDD:293786 9/38 (24%)
ANKYR <42..271 CDD:440430 93/237 (39%)
ANK repeat 48..79 CDD:293786 13/37 (35%)
ANK repeat 81..115 CDD:293786 11/33 (33%)
Caskin1XP_006245957.1 ANK repeat 260..294 CDD:293786 14/66 (21%)
SH3_Caskin1 291..352 CDD:212995 17/71 (24%)
Caskin1-CID 380..428 CDD:465190 11/47 (23%)
SAM_caskin1,2_repeat1 480..545 CDD:188896 10/64 (16%)
SAM_caskin1,2_repeat2 547..616 CDD:188897 11/68 (16%)
PTZ00449 <707..>835 CDD:185628
Caskin-Pro-rich 884..955 CDD:465308
PRK12323 <1224..>1413 CDD:481241
Caskin-tail 1375..1437 CDD:465209
Ank_2 7..86 CDD:463710 24/78 (31%)
ANK repeat 56..86 CDD:293786 12/29 (41%)
ANKYR 59..298 CDD:440430 103/286 (36%)
ANK repeat 88..119 CDD:293786 11/33 (33%)
ANK repeat 121..152 CDD:293786 13/30 (43%)
ANK repeat 154..193 CDD:293786 17/41 (41%)
ANK repeat 195..225 CDD:293786 15/38 (39%)
ANK repeat 228..258 CDD:293786 17/29 (59%)
Blue background indicates that the domain is not in the aligned region.

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