DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-S and pigs-1

DIOPT Version :9

Sequence 1:NP_733060.1 Gene:PIG-S / 42979 FlyBaseID:FBgn0265190 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001369906.1 Gene:pigs-1 / 3565629 WormBaseID:WBGene00011776 Length:550 Species:Caenorhabditis elegans


Alignment Length:558 Identity:119/558 - (21%)
Similarity:215/558 - (38%) Gaps:130/558 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQQTSRGQ 82
            |..:::.|:|:|::::..||:|||..||:.||.|.|:........:||:.   :.:.|.:..|..
 Worm    47 ERPYKLAASLSFVILVFFIGMPMWHFTTSTYRSNFPTFPSNQSITVPIRV---IFVITSEDLRND 108

  Fly    83 L--LIAELQNAFSDNEI-------WSVEFKQLSPTPMTQEAHTPAALEK---------LLLE--- 126
            :  |:.||:...:..|:       |:.:|..|......::.|:....|.         |:.|   
 Worm   109 VKTLMNELEVNMTKKEVVAPLDFTWTTQFIGLRSFEHLEQDHSIQIEENKEFFDVFVALVPEKEW 173

  Fly   127 -----NHVQ-SVGDFMFIEWPKLQEELLLTTERSALMRSDTPSNKIAQLLHAKILQTYRINQILS 185
                 ..:| .:|.:.||:||...||            ....|.::..|:...::....:|.|:.
 Worm   174 THYSATRIQLGIGKWNFIQWPTKSEE------------KQKASTRVTDLVSETLIDVPHLNSIVR 226

  Fly   186 TDERMGAKSEAPQPAYDVIVSVLNPKPRLTHAKWNIAMAVKTY---------------------- 228
            .|.|     :..|| :.:....|:.:.||.   |:.|.....|                      
 Worm   227 RDLR-----QKMQP-WQIAALPLSHQKRLV---WDSAPLATNYHIQVIHLHENSEITPESLKEQE 282

  Fly   229 -----IEPWLAKVSGVSNYTVRSQ--WKYRVAIEADLKQVRDQSKLGRHYALQETALPHLLTSIA 286
                 :..:..||..::|..|..:  |.:.......:|.|:::      :||..:|:..|:..:.
 Worm   283 KTARALRKFAEKVKEITNVEVSFEHLWDFEPTRGFLIKDVQER------WALTHSAMEELVKKVD 341

  Fly   287 QNLSASTTDKPAINLVVYIPPCHIAPLHIYNSKDQRLTRNDVDAFISPPWGGFIIANPPEHVCLA 351
            ..|..|......:..||...   :.|:.:.:.     |..|........||             |
 Worm   342 SQLQTSLQHGAVLRFVVLET---VEPVIVLDD-----TGEDSHGVAVASWG-------------A 385

  Fly   352 AMSDQEAVPYHVSTTDNMQVMLDQLHKLLDISSELQMEGVKVVDIEQLEPRRWEYEAYLRRSAIR 416
            .:...||..........:|:.:|     .::|.......|.:.        :||......|:::.
 Worm   386 VLPRNEATESRAIAAIRIQMGMD-----AELSHGWHRPPVAIC--------QWEVARARLRASVD 437

  Fly   417 HISTASSTLQSLIKLLDQISYIVIDDEVGAAITNSYA---DILAAKAALLEHRLADASVLAKRAF 478
            :...|:|.:::|.:|..:||.|||:|:|....|.:..   |::.....|...||.:|..||..| 
 Worm   438 NAMRAASAVRALDQLAQKISNIVINDDVADRATRAVEILNDVVRPGRMLDFERLLEARRLADSA- 501

  Fly   479 VASERGFFDASLLAQLYFPDEQKYAIYIPLFLPIMVPV 516
                  ..|.||||.||||.:|:.|:.|||.:||::|:
 Worm   502 ------NSDHSLLAMLYFPMDQRTAVLIPLAVPIVLPI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-SNP_733060.1 PIG-S 28..521 CDD:287481 116/548 (21%)
pigs-1NP_001369906.1 PIG-S 57..542 CDD:402233 116/548 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158373
Domainoid 1 1.000 82 1.000 Domainoid score I5459
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 89 1.000 Inparanoid score I3699
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46691
OrthoDB 1 1.010 - - D1399804at2759
OrthoFinder 1 1.000 - - FOG0004772
OrthoInspector 1 1.000 - - oto18557
orthoMCL 1 0.900 - - OOG6_103860
Panther 1 1.100 - - LDO PTHR21072
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R923
SonicParanoid 1 1.000 - - X3925
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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