DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-S and gpi17

DIOPT Version :9

Sequence 1:NP_733060.1 Gene:PIG-S / 42979 FlyBaseID:FBgn0265190 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_594335.1 Gene:gpi17 / 2542284 PomBaseID:SPAC1F12.09 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:542 Identity:129/542 - (23%)
Similarity:233/542 - (42%) Gaps:98/542 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DKDEDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQQTS 79
            :|.|...:..|.|:|.|:|: :.:|:||:||...|.:||..:   :...|  :.||..:....|.
pombe    65 NKPEKSLKRYALLSFYVIIL-LAIPVWWKTTHYERSSLPFED---MENAP--STVQTHLRFSPTF 123

  Fly    80 R-----GQLLIAELQNAF-SDNEIWSVEFKQLSPTPMTQEAHTPAALEKLLLENHVQSVGDFMFI 138
            |     |..|..|:|... ::.:|:|...|.|...|:..         :::|.....       :
pombe   124 RILDDKGNNLTKEVQKVLEAEPQIYSYNLKVLEDDPVDY---------RIVLRESTD-------L 172

  Fly   139 EWPKLQEELLLTTERSALMRSDTPS-----------NKIAQLLHAKILQTY-RINQILSTDERMG 191
            :|...:...::          ||||           |.:.:....::::.: :..:..||.|...
pombe   173 QWFWDENNFII----------DTPSKGPSELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVEPSR 227

  Fly   192 AKSEAP---QPAYDVIVSVL----NPKPRLTHAKWNIAMAVKTYIEPWLAKVSGVSNYTVRSQWK 249
            |:::..   .|.|.|::|:|    |.:|    ..|:|..|::.|..|.:.:::.::...:.:|.:
pombe   228 AETKRTVQFSPQYRVLLSLLVGEGNHEP----INWDIENAIQKYFNPLIEQLASLAKLNIETQIQ 288

  Fly   250 YRVA-IEADLKQVRDQSKLGRHYALQETALPHLLTSIAQNLSAST-TDKPAINLVVYIPPCHIAP 312
            |.|. .||.:|..:        :..:...||:|:.:..:.||.|. ..:|.|:.|:|:|...|.|
pombe   289 YFVEDAEAYIKDDK--------FCTKHADLPNLVNNFEKYLSFSPHIREPTIHFVLYVPSPQIQP 345

  Fly   313 LHIYNSKDQRLTRNDVDAFISPPWGGFIIANPPEHVCLAAMSDQEAVPYHVSTTDNMQVMLDQLH 377
            |.:.|.....:..|   :.:.|.||.....|        ....::.:.:.|...|..:|:...|.
pombe   346 LWLENEDSNIIPTN---SMLLPQWGSITTIN--------FNVTEKKLLHDVDLKDYFRVISRDLL 399

  Fly   378 KLLDISSELQMEGVKVVDIEQLEPRRWEYEAYLRRSAIRHISTASSTLQSLIKLLDQISYIVIDD 442
            .||         |:..|.:..|....  .:..||:........||.|||:|.||:..:..:.:..
pombe   400 LLL---------GINDVPVSSLSATL--ADRLLRQRIAESCIEASDTLQNLAKLVHSMQSMAVPK 453

  Fly   443 EVGAAITNSYADILAAKAALLEHRLADASVLAKRAFVASERGFFDASLLAQLYFPDEQKYAIYIP 507
            |:...:.::...:..|..||.::.|.:|...:..||..|:...|..|::..:|||||.||.||.|
pombe   454 EIQMYVKDTLLSLDMAYKALSQNNLNEALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIYAP 518

  Fly   508 LFLPIMVPVLSSF-----NMLR 524
            ||.||::|:|.||     :|||
pombe   519 LFAPILIPLLISFIKEVKDMLR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-SNP_733060.1 PIG-S 28..521 CDD:287481 122/524 (23%)
gpi17NP_594335.1 PIG-S 78..536 CDD:287481 122/523 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 119 1.000 Domainoid score I1480
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41963
Inparanoid 1 1.050 124 1.000 Inparanoid score I1468
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004772
OrthoInspector 1 1.000 - - oto100710
orthoMCL 1 0.900 - - OOG6_103860
Panther 1 1.100 - - LDO PTHR21072
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R923
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.990

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