DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10845 and kif5ab

DIOPT Version :10

Sequence 1:NP_651309.2 Gene:CG10845 / 42978 FlyBaseID:FBgn0039246 Length:463 Species:Drosophila melanogaster
Sequence 2:XP_009301044.1 Gene:kif5ab / 799274 ZFINID:ZDB-GENE-110510-3 Length:1050 Species:Danio rerio


Alignment Length:550 Identity:124/550 - (22%)
Similarity:204/550 - (37%) Gaps:169/550 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RVYLFRKLLTSPTD-LQLEVSAEAISEVLDQVLGGRISTVFSCGRIPFN---------HGADPSD 70
            |.|:|.|:.  ||: .|.:|......:::..||.|...|:|:.|:....         |.|:...
Zfish    45 RSYVFDKVF--PTNCTQEQVYNTCAQQIVKDVLDGYNGTIFAYGQTSSGKTYTMEGKLHDANGRG 107

  Fly    71 VVSRILNELFTRIYELETNMEVHVSVRYVQLN-----------------GETNDLVVNLKGCNRR 118
            ::.||..::|..||.::.|:|.|:.|.|.::.                 .|..:.|..:|||..|
Zfish   108 IIPRIAEDIFNHIYTMDENLEFHIKVSYFEIYMDKIRDLLDVTKTNLSVHEDKNRVPYVKGCTER 172

  Fly   119 TTRDHFVATSHGVHAYIARVMDKVAEG--------------GDCPHLIFTVHVKQTNGDQLRKCC 169
                 ||::..       .|||.:.||              ....|.||.:::||.:.:..:|.|
Zfish   173 -----FVSSPE-------EVMDLIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQEHVETEQKLC 225

  Fly   170 GRLQLVHLQQLTEDSPPLESDTPLD----------TLISLFQVLANSPKTHIRYYNIRLTRLLNQ 224
            |:|.||.|....:.|........||          .|.::...||...|||:.|.:.::||:|..
Zfish   226 GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQD 290

  Fly   225 LMGNGSRTVIINYADPPEGKDDPVTPAPTPSS-----------NS---NASLPDEVWRRLLRQER 275
            .:|...||.:.....|....|     |.|.|:           ||   |..|..|.|:|...:|:
Zfish   291 SLGGNCRTTMFICCSPSAYND-----AETKSTLMFGQRAKTIMNSASVNLELTAEQWKRKYEKEK 350

  Fly   276 AKYRCLRNKALGIVVDKEELERFLESLE---------------------ASDSSEEDISDGDFEQ 319
            .|     ||.|     ||.::|....|.                     ..|::.::.|.|..|.
Zfish   351 EK-----NKDL-----KESMQRLEAELNHWRNGESVVLITPVSPAECDVTEDTAVDNQSHGQTEL 405

  Fly   320 KVEQKMLAIRSEAEMSIKKLKGLQMDIDYLTERNCHLEQQLDQKNSQLNMQSNLMLSIHMELRDQ 384
            ..||.    .|..|..|::                 |.:|||.|:.::|:|..|:..:..::.||
Zfish   406 IPEQH----NSRYEEEIQQ-----------------LYRQLDDKDDEINLQCQLVEKLKEQMLDQ 449

  Fly   385 -----------------TRKFQD-------KIAEYTDKFQEM---WERQRLDIQYNEQRQLRQLT 422
                             .|:.|.       ::.|.....:|:   ::.:.|:.|.| .|..|:||
Zfish   450 EELLACARADLERVQCDVRRLQADSESSKLEVQEVLQALEELALSYDHKSLEAQDN-SRHNRRLT 513

  Fly   423 KLFDSLCQATQRWLHRKT--SRLPQKDADE 450
               :.|...|...|..::  |||.:.:..:
Zfish   514 ---EELAHTTSALLSLESDFSRLQEVNGQQ 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10845NP_651309.2 Motor_domain 16..236 CDD:473979 67/270 (25%)
PLN03229 <283..372 CDD:178768 23/109 (21%)
kif5abXP_009301044.1 KISc_KHC_KIF5 7..327 CDD:276820 72/300 (24%)
SMC_prok_B <408..738 CDD:274008 32/157 (20%)
EnvC 700..>921 CDD:443969
Khc_CBD_cc 853..922 CDD:467880
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.