DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10845 and Khc

DIOPT Version :10

Sequence 1:NP_651309.2 Gene:CG10845 / 42978 FlyBaseID:FBgn0039246 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster


Alignment Length:514 Identity:122/514 - (23%)
Similarity:211/514 - (41%) Gaps:101/514 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RVYLFRKLLTSPTDLQLEVSAEAISEVLDQVLGGRISTVFSCGRIPF--NHGAD-------PSDV 71
            :||||.|:. .|...|.:|..||...::..||.|...|:|:.|:...  .|..:       ...:
  Fly    51 KVYLFDKVF-KPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGI 114

  Fly    72 VSRILNELFTRIYELETNMEVHVSVRYVQL-NGETNDLV----VNL------------KGCNRRT 119
            :.||:|::|..||.:|.|:|.|:.|.|.:: ..:..||:    |||            ||...| 
  Fly   115 IPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATER- 178

  Fly   120 TRDHFVATSHGVHAYIAR-------VMDKVAEGGDCPHLIFTVHVKQTNGDQLRKCCGRLQLVHL 177
                ||::...|...|..       .:..:.|.....|.:|.::|||.|.:..:|..|:|.||.|
  Fly   179 ----FVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDL 239

  Fly   178 QQLTEDSPPLESDTPLD----------TLISLFQVLANSPKTHIRYYNIRLTRLLNQLMGNGSRT 232
            ....:.|......|.||          .|.::...||:..||||.|.:.:|||:|.:.:|..:||
  Fly   240 AGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNART 304

  Fly   233 VIINYADPPEGKDDPVTPAPTPSSNS--------------NASLPDEVWRRLLRQERAKYRCLRN 283
            .|:....|....:     :.|.|:..              |..|..|.|:|...:|:.|...|:.
  Fly   305 TIVICCSPASFNE-----SETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKG 364

  Fly   284 KALGIVVDKEELE----RFLESLEASDS-SEEDISDGDFEQKVEQKMLAIRSEAEMSIKKLKGLQ 343
            |     |:|.|:|    |..|:::|.:. :.||:.:........:......:||.::.::.....
  Fly   365 K-----VEKLEIELARWRAGETVKAEEQINMEDLMEASTPNLEVEAAQTAAAEAALAAQRTALAN 424

  Fly   344 MDIDYLTERNCHLE-------QQLDQKNSQLNMQSNLMLSIHMELRDQTRKFQDKIAEYTDKFQE 401
            |...........|.       ||||.|:.::|.||...    .:|::|..:.::.||....:::.
  Fly   425 MSASVAVNEQARLATECERLYQQLDDKDEEINQQSQYA----EQLKEQVMEQEELIANARREYET 485

  Fly   402 MWERQRLDIQYNE--QRQLRQLTKLFDSLC----QATQRWLHRKTSRLPQKDADELHSQ 454
            :........|.||  :.:::::.:..:.|.    |.:|. :..|     .||.|.|:.:
  Fly   486 LQSEMARIQQENESAKEEVKEVLQALEELAVNYDQKSQE-IDNK-----NKDIDALNEE 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10845NP_651309.2 Motor_domain 16..236 CDD:473979 74/262 (28%)
PLN03229 <283..372 CDD:178768 21/100 (21%)
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 77/292 (26%)
Smc <341..>807 CDD:440809 44/213 (21%)
Khc_CBD_cc 856..925 CDD:467880
Blue background indicates that the domain is not in the aligned region.

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