DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10845 and Kif5c

DIOPT Version :10

Sequence 1:NP_651309.2 Gene:CG10845 / 42978 FlyBaseID:FBgn0039246 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001101200.1 Gene:Kif5c / 311024 RGDID:1308539 Length:955 Species:Rattus norvegicus


Alignment Length:550 Identity:128/550 - (23%)
Similarity:209/550 - (38%) Gaps:157/550 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GEMRVYLFRKLLTSPTDLQLEVSAEAISEVLDQVLGGRISTVFSCGRIPFN---------HGADP 68
            |:.:.|:|.::| .|...|.:|......:::..||.|...|:|:.|:....         |....
  Rat    42 GQGKPYVFDRVL-PPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPQL 105

  Fly    69 SDVVSRILNELFTRIYELETNMEVHVSVRYVQLN----------GETN-------DLVVNLKGCN 116
            ..::.||.:::|..||.::.|:|.|:.|.|.::.          .:||       :.|..:|||.
  Rat   106 MGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLAVHEDKNRVPYVKGCT 170

  Fly   117 RRTTRDHFVATSHGVHAYIARVMDKVAEG--------------GDCPHLIFTVHVKQTNGDQLRK 167
            .|     ||::..       .|||.:.||              ....|.||.:::||.|.:..:|
  Rat   171 ER-----FVSSPE-------EVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQENVETEKK 223

  Fly   168 CCGRLQLVHLQQLTEDSPPLESDTPLD----------TLISLFQVLANSPKTHIRYYNIRLTRLL 222
            ..|:|.||.|....:.|........||          .|.::...||...|||:.|.:.::||:|
  Rat   224 LSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRIL 288

  Fly   223 NQLMGNGSRTVIINYADPPEGKDDPVTPAPTPSS--------------NSNASLPDEVWRRLLRQ 273
            ...:|...||.|:....|     .....|.|.|:              :.|..|..|.|::...:
  Rat   289 QDSLGGNCRTTIVICCSP-----SVFNEAETKSTLMFGQRAKTIKNTVSVNLELTAEEWKKKYEK 348

  Fly   274 ERAKYRCLRNKALGIVVDKEELERFLESLEASDSSEEDISDGDFEQKVEQKMLAIRSEAEMSIKK 338
            |:.|     ||||..|:...|:|     |....:.|                 |:..:.::|.|.
  Rat   349 EKEK-----NKALKSVIQHLEVE-----LNRWRNGE-----------------AVPEDEQISAKD 386

  Fly   339 LKGLQ-MD----IDYLT--------------ERNCHLEQQLDQKNSQLNMQSNLMLSIHMELRDQ 384
            .|.|: .|    ||.:|              |....|.:|||.|:.::|.||.|...:..::.||
  Rat   387 QKNLEPCDNTPIIDNITPVVDGISAEKEKYDEEITSLYRQLDDKDDEINQQSQLAEKLKQQMLDQ 451

  Fly   385 ------TRKFQDKIAEYTDKFQ--------EMWE----RQRLDIQYNEQRQ-----LRQLTKLFD 426
                  ||:..:||.|...:.|        |:.|    .:.|.:.|:::.|     .|...:|.|
  Rat   452 DELLASTRRDYEKIQEELTRLQIENEAAKDEVKEVLQALEELAVNYDQKSQEVEDKTRANEQLTD 516

  Fly   427 SLCQATQRWLHRKTSRLPQKDADELHSQTN 456
            .|.|.|      .|....|::..:|...:|
  Rat   517 ELAQKT------TTLTTTQRELSQLQELSN 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10845NP_651309.2 Motor_domain 16..236 CDD:473979 66/269 (25%)
PLN03229 <283..372 CDD:178768 26/107 (24%)
Kif5cNP_001101200.1 KISc_KHC_KIF5 6..327 CDD:276820 71/302 (24%)
Microtubule-binding 174..315 37/152 (24%)
YhaN 407..>751 CDD:443752 32/139 (23%)
Smc 616..>923 CDD:440809
Khc_CBD_cc 835..904 CDD:467880
Globular 859..955
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 909..955
Blue background indicates that the domain is not in the aligned region.

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