DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and ABCG24

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_175745.4 Gene:ABCG24 / 841775 AraportID:AT1G53390 Length:1109 Species:Arabidopsis thaliana


Alignment Length:566 Identity:133/566 - (23%)
Similarity:224/566 - (39%) Gaps:103/566 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 NSALVLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADGA-TRGQVLLNGSPLSKALFQQRC 95
            |...||:.|..::..|.:.|::|..|:||.:||..::.:|.|. ..|.:|:||...|...:::..
plant   519 NGKQVLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGKAVGCKLSGLILINGKQESIHSYKKII 583

  Fly    96 GYVTQSCTFVPGLTVAQTLHY-----TPTILSGYLKSSKVRQVLADLALSQVAHK---RVEYLNI 152
            |:|.|.......|||.:.|.:     .|..||...|...|.:::..|.|..|...   .||...|
plant   584 GFVPQDDVVHGNLTVEENLWFHAKCRLPADLSKADKVLVVERIIDSLGLQAVRSSLVGTVEKRGI 648

  Fly   153 S--EARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVF 215
            |  :.:|:.:|:::|.:|.:|.|||||.|||..|:.||:..|.:.|.: |..|.:.:.:|...:|
plant   649 SGGQRKRVNVGLEMVMEPSVLFLDEPTSGLDSASSQLLLRALRHEALE-GVNICMVVHQPSYTLF 712

  Fly   216 PFLDRALFLCLGGV-VYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCL----------------- 262
            ...:..:.|..||: ||.|....:.|||.|:|...|...||..||:.:                 
plant   713 KTFNDLVLLAKGGLTVYHGSVNKVEEYFSGLGIHVPDRINPPDYYIDVLEGVVISMGNSGIGYKE 777

  Fly   263 ------------STVDRRSRDRF-LESSQQI-----EALVERFSRETPISDAPLN-NMGSGKVPL 308
                        ..:|.|:.... ||::..:     :...:.|:||. ..|...| .:...|:..
plant   778 LPQRWMLHKGYSVPLDMRNNSAAGLETNPDLGTNSPDNAEQTFAREL-WRDVKSNFRLRRDKIRH 841

  Fly   309 AYGKPGEL------KVWVM--LYLKLLASTFSCGLVGMKTLFLRLLLLPLALSILWAFYTDVGDD 365
            .:.|..:|      ..|:.  .:|..:|...........|.:|.|||....|..|    ....|:
plant   842 NFLKSRDLSHRRTPSTWLQYKYFLGRIAKQRMREAQLQATDYLILLLAGACLGSL----IKASDE 902

  Fly   366 SHGFFTKNGMILNILGLSYGCGI--LTTISLFPI--WRKKFSQDTPEGLYSGTTLLIAYNSVSIP 426
            |.|   ..|.|..|:.:|..|.|  |.:.||..:  ||:..|..:....:.....:..:|.:..|
plant   903 SFG---APGYIYTIIAVSLLCKIAALRSFSLDKLHYWRESASGMSSSACFLAKDTIDIFNILVKP 964

  Fly   427 FSAVSA---------------VIASCVVYPLLLDVKYNNGTVFAYLLVALW---SSFVLAEQLTI 473
            ...:|.               ::..|:||.:         |..||.|....   ::.:.:..|.:
plant   965 LVYLSMFYFFTNPRSTFFDNYIVLVCLVYCV---------TGIAYALAIFLQPSTAQLFSVLLPV 1020

  Fly   474 AFLLVVKVPFNAAIA-----VTYVLVISIALASGTVRSFKGLQPWL 514
            ...||...|.|:.:.     ::|......|...|..:.:.|:  |:
plant  1021 VLTLVATQPKNSELIRIIADLSYPKWALEAFVIGNAQKYYGV--WM 1064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 65/212 (31%)
CcmA 31..302 CDD:224054 85/317 (27%)
ABC2_membrane 364..515 CDD:304374 35/178 (20%)
ABCG24NP_175745.4 EcfA2 504..736 CDD:224047 66/217 (30%)
ABCG_EPDR 505..731 CDD:213180 65/212 (31%)
ABC2_membrane 867..>1006 CDD:304374 33/154 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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