DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and ABCG12

DIOPT Version :10

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_175561.1 Gene:ABCG12 / 841575 AraportID:AT1G51500 Length:687 Species:Arabidopsis thaliana


Alignment Length:525 Identity:136/525 - (25%)
Similarity:232/525 - (44%) Gaps:102/525 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FNGAGNSALVLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRR--ADGATRGQVLLNGSPLSKA 89
            |:| |.:..:|.|:|.....|.:|||:|..||||..|||.::.|  .:....|.:||||   .||
plant    36 FSG-GPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNG---KKA 96

  Fly    90 -LFQQRCGYVTQSCTFVPGLTVAQTLHYTPTI-LSGYLKSSKVRQV----LADLALSQVA----- 143
             |......||||....:..|||.:|:.|:..: ||..|...:|..:    :.:|.|...|     
plant    97 RLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIG 161

  Fly   144 --HKRVEYLNIS--EARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGIL 204
              |.|    .:|  |.:|:::.::::..|.:|.|||||.|||..||:.:|..|.|.|:..|..::
plant   162 NWHSR----GVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVV 222

  Fly   205 LSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYL-CLSTVDRR 268
            .|:.:|.|:||...|....|..|..||.|.::..:|:|...|||||:..||..::| |::: |..
plant   223 SSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPSDHFLRCINS-DFD 286

  Fly   269 SRDRFLESSQQIEALVERFSRETPISDAPLNNMGSGKVPL---------AYGKPGELKV------ 318
            :....|:.||:|        ||||.:..||.|:.:.::..         .|.|..:.::      
plant   287 TVTATLKGSQRI--------RETPATSDPLMNLATSEIKARLVENYRRSVYAKSAKSRIRELASI 343

  Fly   319 ---------------WVMLYLKLLASTF--SCGLVGMKTLFLRLLLLPLALSILWAFYTDVGDDS 366
                           |......|...:|  .|..:|.  .:.|:::..:....:...:.|||   
plant   344 EGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCRDIGY--YWSRIVIYIVVSFCVGTIFYDVG--- 403

  Fly   367 HGFFTKNGMILNILGLSYGCGILTTISL--FPIW---RKKFSQDTPEGLYSGTTLLIAYNSVSIP 426
            |.:   ..::..:....:..|.:|.:|:  ||.:   .|.|.::...|.|..:..:|:....|.|
plant   404 HSY---TSILARVSCGGFITGFMTFMSIGGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFP 465

  Fly   427 FSAVSAVIASCVVYPLLLDVKYNNGTVFAYLLVALWSSFVLAEQLTIAFLLVVKVPFNAAIAVTY 491
            |....|:|...:.|.:   ||:..|       |:.|:.|.|            .:.|:.::..:.
plant   466 FLVAIALITGSITYNM---VKFRPG-------VSHWAFFCL------------NIFFSVSVIESL 508

  Fly   492 VLVIS 496
            ::|::
plant   509 MMVVA 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 75/222 (34%)
ABC2_membrane 364..515 CDD:473876 26/138 (19%)
ABCG12NP_175561.1 3a01204 40..635 CDD:273361 133/520 (26%)

Return to query results.
Submit another query.